Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1551 ATGCACGGTTCTTGCTTCTCATACAATGGTGGCCGCATATTTCTTGATGGATACATCATGAGGTCTAAAAATTATAGCTTCTTTGATGAGTATGCAGGGCCAGAGGACAAGGTTGTTTGTGGCAACAAAACTAGGACAAATTCAAGTTTTCGAGCAGTCGCAAAGCGGGTGGTTTTGGAAGTAGTTCAAGCTGCACCAAACAGCATAGGATACTATGGAAGATGGAAGCTTGATATTTCTCGAAGGAGGTTGTACTTCAACAACAGGCATAGAGCAGCATATTTCTACAATGAAGTCAACATAATTAGTAGTGTGGAGCACAAGAATCTCGTGAGGTTGTTAGGATGCCGCTATTCTGGACTCGAAAGCTTGCTCGTATATGAATTTCTACCGAACAAAAGTCTTGATCAATTTATATTTGATAGAGTCAAGGGAAGAGAACTAAACTGGGAGAAGAGATATGACATTATCATTGGAACAGCTGAAGGATTGGTTTACCTGCATGAGAATTCAAAAACTAGGATAATTCACAGAGATATAAAAGCCAGCAACATCTTATTGGATGCTAAACTTCGCGCCAAAATTGCTGACTTCGGACTGGCCAGGTCCTTTCAAGAAGATAAGAGGGGTTACATGGCTCCAGAGTACCTAGCTCATGGTCAGTTAACAGAAAAGGCAGATTTACTAGGAAACAGAATAACAAAAACAAATCAACATAATACTCAGATAACATGGAGGTGTTTCCAATCAGGGACAGCAGAAGAGCTATTTGATCCAAATCTAGTTTCAGATAACAATAATGTTAATAAGAAAGATGAGATTTTAAAAGTGGTGCACATAGGACTTCTATGCACACAAGAGAACCCTTCCTTAAGACCAACCATGTCAAGGGCACTACAGATGCTAACAAAGAAGGAAGAGAATCTTGCACGTCCCTCTAATCAACCCTTCATAGATGAGAACACAATGGATCTTAGAAGAATTGAACAACTAATGTCCAGTCTGTGCTCATGTATTTCCTTGTAA 1026 0.3967 MHGSCFSYNGGRIFLDGYIMRSKNYSFFDEYAGPEDKVVCGNKTRTNSSFRAVAKRVVLEVVQAAPNSIGYYGRWKLDISRRRLYFNNRHRAAYFYNEVNIISSVEHKNLVRLLGCRYSGLESLLVYEFLPNKSLDQFIFDRVKGRELNWEKRYDIIIGTAEGLVYLHENSKTRIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKRGYMAPEYLAHGQLTEKADLLGNRITKTNQHNTQITWRCFQSGTAEELFDPNLVSDNNNVNKKDEILKVVHIGLLCTQENPSLRPTMSRALQMLTKKEENLARPSNQPFIDENTMDLRRIEQLMSSLCSCISL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1551 341 Gene3D Transferase(Phosphotransferase) domain 1 130 324 - -
Amo09g1551 341 SMART serkin_6 37 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1551 341 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 79 330 - -
Amo09g1551 341 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 3 69 - -
Amo09g1551 341 ProSiteProfiles Protein kinase domain profile. 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1551 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Amo09g1551 341 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 79 330 - -
Amo09g1551 341 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 3 69 - -
Amo09g1551 341 SUPERFAMILY Protein kinase-like (PK-like) 89 303 IPR011009 -
Amo09g1551 341 Gene3D Phosphorylase Kinase; domain 1 70 129 - -
Amo09g1551 341 Pfam Protein tyrosine and serine/threonine kinase 90 300 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1551 Amo-Chr9 58526293 58528683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1551 1 71 Receptor kinase-like Gene Family AT1G70520 49.296 5.14e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo09g1551 PK_Tyr_Ser-Thr 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1551 - - aip:107631343 415.231