Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1528 ATGACTGAAGTCTCACCACCTTTTGTAAAACAAGAGGGTTCCAACTCAGATTCTTTTCCAGATTCCTCTACAGCTGGAAATGAATACCGAGCATTGAGGCGGAAGTATCTGTTGCTGGAGGATGAGAGCTTTTTATTAGGGAAAGAGCTAAGAGAGTTAGCTTTGCAAACATCTCAAGTGTGCAAAGAACTTGGAAAGCACTTGAAAATTCAAGTGATGGTTACAACTGGTGGTACTAGCCTGAAAGATGATATCTTACGCTTATATCAACCAGTTTATTTACTAGTTGGGACTCCTGGAAGGATATGGGATCTCGCTAAAAAGGGTGTTTGCGTTCTGAAAGATTCCGCAATGCTTGTTATGGATGAGGTAAATACTTTTTTAACACAACTTTTACTCATTTATAAAAGTGGTTGA 417 0.3909 MTEVSPPFVKQEGSNSDSFPDSSTAGNEYRALRRKYLLLEDESFLLGKELRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDILRLYQPVYLLVGTPGRIWDLAKKGVCVLKDSAMLVMDEVNTFLTQLLLIYKSG* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1528 138 MobiDBLite consensus disorder prediction 7 25 - -
Amo09g1528 138 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 50 138 IPR014001 -
Amo09g1528 138 MobiDBLite consensus disorder prediction 1 25 - -
Amo09g1528 138 Gene3D - 49 133 IPR027417 -
Amo09g1528 138 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 50 129 - -
Amo09g1528 138 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6 50 129 - -
Amo09g1528 138 Pfam DEAD/DEAH box helicase 50 130 IPR011545 GO:0003676|GO:0005524
Amo09g1528 138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 134 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1528 Amo-Chr9 56261318 56263538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1528 51 130 Eukaryotic Initiation Factors Gene Family AT3G13920 37.500 1.59e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1528 K12614 - ahf:112710988 246.899