Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1514 ATGCTTACTCTAAAACTATTTGTTTACACGGTAGTGATATTCTTTGTTTCTCTTTTCATCTTTGGATTCCTATCTAATGATCCGGGACAATTCCATACTCGATCTCATAGATACATATGGATACATATAGAATTCTGTGGAAAGCCGTATTTGATGAAAGTCATTATCCCTTTCACGCTCATGTCACGGCGAGGTACTGTAGAAGAAAAAACCGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATTTATCGAGCTATGAAAAAGATTCAAAAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAAGCAAGACGTGTAGGCGGATCTACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCAAAAGGGAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA 648 0.3843 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGQFHTRSHRYIWIHIEFCGKPYLMKVIIPFTLMSRRGTVEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQKKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1514 215 SUPERFAMILY Ribosomal protein S7 62 209 IPR036823 -
Amo09g1514 215 Pfam Ribosomal protein S7p/S5e 61 209 IPR023798 -
Amo09g1514 215 CDD uS7_Chloroplast 70 214 - -
Amo09g1514 215 Hamap 30S ribosomal protein S7 [rpsG]. 61 215 IPR005717 GO:0003735|GO:0006412|GO:0015935
Amo09g1514 215 SUPERFAMILY Photosystem II reaction center protein I, PsbI 1 30 IPR037271 GO:0015979
Amo09g1514 215 TIGRFAM rpsG_bact: ribosomal protein uS7 63 215 IPR005717 GO:0003735|GO:0006412|GO:0015935
Amo09g1514 215 PANTHER 30S RIBOSOMAL PROTEIN S7, CHLOROPLASTIC 61 215 - -
Amo09g1514 215 Gene3D Ribosomal protein S7 domain 61 215 IPR036823 -
Amo09g1514 215 PANTHER RIBOSOMAL PROTEIN S7 61 215 IPR000235 GO:0006412
Amo09g1514 215 Hamap Photosystem II reaction center protein I [psbI]. 1 36 IPR003686 GO:0009523|GO:0009539|GO:0015979|GO:0016020
Amo09g1514 215 Pfam Photosystem II reaction centre I protein (PSII 4.8 kDa protein) 1 29 IPR003686 GO:0009523|GO:0009539|GO:0015979|GO:0016020
Amo09g1514 215 ProSitePatterns Ribosomal protein S7 signature. 80 106 IPR020606 GO:0003723|GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1514 Amo-Chr9 55222929 55223869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1514 81 209 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 35.294 4.61e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1514 K02992 - rcu:125368899 303.138