Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1492 ATGCGATTCGATCAATCGCTCATTGGGACTCCAGTGAATATTATTGTGGGTTCTCATGTCTGGATTGAAGATCCAGATATCTGTTGGATTGATGGACAGGTATCAAAAATCACCGGAAAGGATGCTGAAATTGAAACTACCAATGGAAAAAAGGTGGTTGCAAATTTATCAAAAATATATCCCAAAGATATGGAAGCTCCTCCTGGTGGAGTGGATGATATGACTAAGTTGTCCTATTTACATGAACCTGGAGTCCTGCAGAACTTGAAAGCTAGATATGAATTGAATGAAATATATACATATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAAACTACCACATATCTATGGTGCACACATGATGCAACAATACAAGGGAGCACCATTTGGAGAATTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCAATGATAAATGAAGGGAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGCAAAACTGAAACCACAAAAATGCTTATGCAATTCCTTGCTTATCTAGGTGGTAGGGCTGGCACTGAAGGCCGAACAGTTGAACAACAAGTTCTTGAGTCAAATCCAGTTCTAGAAGCATTTGGCAATGCAAAAACTGTCAGGAATAACAATTCTAGTCGGTTTGGTAAATTTGTGGAGATCCAATTTGATAAAAGTGGAAGAATCTCAGGAGCAGCCATCAGAACATACCTTCTAGAGAGATCTCGGGTTTGCCAAGTTAATGATCCTGAACGCAACTATCACTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAGATACAAATTAGGAAGTCCTAAAACTTTTCACTACCTTAACCAGTCAAAATGCTATGAACTGGCTGACGTAAGTGATGCTCGTGAGTTTCTTGCCACCCGTAGAGCTATGGATATTGTTGGAATCAGCCAAAAGGATCAGGAAGCCATTTTTAGAGTTGTTGCTTCAATTCTCCATCTTGGTAATATTGACTTTACCAAAGGAAAAGAAGTTGACTCATCAGTTCCGAAAGATGACAAAGCCAAATTCCACCTTCAAACTACTGCTGAGCTTCTAATGTGTGATGCCAATGCTTTGCAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTTATAAAACGGAGCCTTGATCCCCAAAGTGCAACAGTGAGTAGAGATGGACTGGCAAAAACAATTTATTCTCGGCTGTTCGACTGGTTGGTGGACAAGATTAATAGTTCAATTGGACAAGACCCCAATTCTAAAACTTTGATTGGAGTCCTTGACATATATGGTTTTGAAAGTTTTAAAACTAACAGCACGTTTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAAATTAATTGGAGCTACATTGAATTTGTTGATAACCAAGATCATGTTTCCAAAGTCTACGCATGAAACTTTTGCAAACAAGCTTTATCAAACATTTAAGAACCACAGGCGCTTTATTAAGCCAAAATTGTCTCGAACAGATTTCACGATTGCTCACTATGCTGGGGAGGTTTTATACCAGTCTGATCAATTTCTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTGTTGAGTGCTTCCAAATGTCCTTTTGTAGCTGGCCTTTTTCCACCACTTCCAGAAGAGACATCAAAATCTTCCAAATTTTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAAAGTCTAATGGACACATTAAATTCTACAGAACCCCATTACATCAGATGTGTGAAACCAAATAACCTCTTGAAGCCTGCTATTTTTGAGAATGCCAACATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGCTATCCTACTCGCCGCGCTTTTTTTGAATTTGTGAACAGATTTGGCCTTCTTGCTCCAGAGGCCACAGAAGCAAACTATGATGAAAAGACTGCTTGCCAAAAGATTCTGGAAAAGATGGGGCTTAGTGGATATCAGATTGGAAAGACAAAGGTATTTCTAAGAGCAGGTCAGATGGCTGAACTAGATGCACGTAGAGCTCAAGTACTCAGTAATGCAGCAAAAAGTATCCAGCGGCGCATAAGAACTCATCAAGCACGTAATCATTATCTTGCGCTTCGAAAGAAGACCATATATCTGCAGTCTCAGTGGAGAGGAAGACTTGCATGCAAACTATATGAAAACATGAGAAAGGAGGCTGCTGCTGTGAAAATCCAAAAGAACACACGCAGATATCAAGCTCGGAGAGCCTACAAGAAACTTCATATGTCAGCATTGACAGTTCAAACAGCTTTAAGGGCAACAGCTGCTCGCAAGGAGTTCAGATTTAGGAAGCAGACCAAAGCCTCCATTATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCATTATATTATAAGAGGCTCAAGAAAGGGACCATAGTTACACAATGCAGATGGAGGGGACGTGTAGCCAGAAGAGAACTTAGGAAACTAAAAATGGCTGCAAGAGAAACTGGTGCACTTCAAGAAGCGAAGGATAAGCTTGAGAAACGTGTGGAGGAACTCACTTGGCGTCTCCAGCTAGAAAAAGGATTAAGGACGAATCTAGAAGAATCCAAATCTCAAGAGATAGCAAAACTGCAGAATCAATTGCAGGAGATGCAGAGCAAATTTGAGGAGACCAATGCTCTGCTTTCCAAGGAGCGTGAGAATGCAAAGAAAATTAGTATAGAAGCAGTTCCTGTTATTCAAGAGAAACAGGTTATCGTTGAAGATACACAGAAGATTGACGCACTGACGGCAGAAATTGAGAGCCTAAAGACGTCACTCGAGTCAGAGAAACAGAAATCTAATGACTTTGAACAAAAATATAATGAAGCCCAAGCTAGCAGTGAAGAAAGAGGTAAAAAGTTAGAAGACACAGAGAAGAAGGTTCGTCAACTCCAAGAATCATTGAAGGGGCTAGAAGAGAAGATTAATAATGTAGAATCAGAGAATCAGGTTCTRCGTCAACAAGCTGTATCGACTAAGTTCCTTCATAGACGCCAGAGCTCACTTGCCCAGAGAGAGAGGGCTGCTGAAAGTGCTCATAATAGTATTGCAGTGGAGGGGAAGCCACAAGTGACTAATCAGGAACTTCAAACTAGCCCATCAATGAACCTGAGGGAATCCTCTGAAGTGGATGATAAACCACAGAAGTCACTAAATGAGAAACAACAAGAGAATCAAGAATTACTCATTAGATGCATTGCACAACATCTAGGATTTGCTGGAAACAGACCAATTGCTGCCTGTATCATATATAAGTGCCTCTTGCATTGGAGATCATTTGAAGTTGAGCGCACTAGCGTTTTCGATAGAATCATCCAGACTATTGGCCATGCAATTGAGACCCAGGATAATAATGATGTCTTAGCTTACTGGTTATCCAATGCCTCGACACTTCTCTTGTTACTCCAACGCACACTCAAGGCAAGTGGTGCTGCTGGAATGGCTCCACAACGCCGTCGTTCTCAATCAGCAACCCTATTTGGGAGGATGACTCAGAGTTTCCGTGGAAGTCCAGCAGGAGTCAATCTGTCCTTAATTAATGGTAGTTCAAGTAGAGGAGTAGATACATTAAGACAAGTTGAAGCCAAGTACCCAGCTTTGCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGTGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTGTGCATTCAGGCACCAAGAACATCCAGAGCAAGCTTGGTTAAGGGATCGTCACGTTCTGTTGCAAACACTGAAGCCCAGCGAGCTTTGATTGCTCATTGGCAGGGGATCGTTAAGAGCCTAGGGAACTTTTTAAATACATTGAAAGCAAATCATGTTCCACCATTTTTGGTTCGTAAGGTGTTCACGCAAATTTTTTCTTTCATCAATGTACAACTATTCAATAGTCTTCTTCTTAGACGAGAGTGTTGCTCATTTAGTAATGGAGAATATGTAAAAGCTGGTTTGGCTGAACTAGAGCATTGGTGTTATAAGGCAACGGATGAGTATGCAGGTTCCGCTTGGGATGAGCTCAAACATATTAGACAAGCCATTGGATTTCTGGTTATACATCAAAAACCGAAGAAGACACTGGATGAAATAAGTCATGACCTGTGCCCAGTCCTCAGTATACAGCAGTTATATCGGATTAGCACCATGTATTGGGATGACAAATATGGCACGCATAGTGTGTCACCTGAAGTCATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCATTTTCTGTTGATGACATTTCAAAGTCAATGGAACAAATAGATATCTCTGATATAGATCCACCGCCACTTATACGGGAAAACTCCGGGTTTAGCTTTTTATTACCACGCCCAGCTTGA 4512 0.4069 MRFDQSLIGTPVNIIVGSHVWIEDPDICWIDGQVSKITGKDAEIETTNGKKVVANLSKIYPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKARYELNEIYTYTGNILIAINPFQKLPHIYGAHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMQFLAYLGGRAGTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPQEEIERYKLGSPKTFHYLNQSKCYELADVSDAREFLATRRAMDIVGISQKDQEAIFRVVASILHLGNIDFTKGKEVDSSVPKDDKAKFHLQTTAELLMCDANALQDALCKRVMITPEEVIKRSLDPQSATVSRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKTLIGVLDIYGFESFKTNSTFLKWNKKNIQRSKLIGATLNLLITKIMFPKSTHETFANKLYQTFKNHRRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVPEHQDLLSASKCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQSLMDTLNSTEPHYIRCVKPNNLLKPAIFENANIMQQLRCGGVLEAIRISCAGYPTRRAFFEFVNRFGLLAPEATEANYDEKTACQKILEKMGLSGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKSIQRRIRTHQARNHYLALRKKTIYLQSQWRGRLACKLYENMRKEAAAVKIQKNTRRYQARRAYKKLHMSALTVQTALRATAARKEFRFRKQTKASIIIQARWRCHKAALYYKRLKKGTIVTQCRWRGRVARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKGLRTNLEESKSQEIAKLQNQLQEMQSKFEETNALLSKERENAKKISIEAVPVIQEKQVIVEDTQKIDALTAEIESLKTSLESEKQKSNDFEQKYNEAQASSEERGKKLEDTEKKVRQLQESLKGLEEKINNVESENQVLRQQAVSTKFLHRRQSSLAQRERAAESAHNSIAVEGKPQVTNQELQTSPSMNLRESSEVDDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSQSATLFGRMTQSFRGSPAGVNLSLINGSSSRGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPEVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIDPPPLIRENSGFSFLLPRPA* 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1492 1503 SMART iq_5 750 772 IPR000048 GO:0005515
Amo09g1492 1503 SMART iq_5 773 795 IPR000048 GO:0005515
Amo09g1492 1503 SMART iq_5 725 747 IPR000048 GO:0005515
Amo09g1492 1503 SMART iq_5 821 843 IPR000048 GO:0005515
Amo09g1492 1503 SMART iq_5 798 820 IPR000048 GO:0005515
Amo09g1492 1503 SMART iq_5 702 724 IPR000048 GO:0005515
Amo09g1492 1503 Coils Coil 845 872 - -
Amo09g1492 1503 MobiDBLite consensus disorder prediction 1070 1084 - -
Amo09g1492 1503 Gene3D - 259 317 - -
Amo09g1492 1503 Gene3D Kinesin motor domain 592 630 IPR036961 -
Amo09g1492 1503 Pfam IQ calmodulin-binding motif 824 843 IPR000048 GO:0005515
Amo09g1492 1503 Pfam IQ calmodulin-binding motif 705 723 IPR000048 GO:0005515
Amo09g1492 1503 Pfam IQ calmodulin-binding motif 800 820 IPR000048 GO:0005515
Amo09g1492 1503 Pfam IQ calmodulin-binding motif 753 772 IPR000048 GO:0005515
Amo09g1492 1503 MobiDBLite consensus disorder prediction 955 989 - -
Amo09g1492 1503 Pfam Myosin head (motor domain) 471 688 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo09g1492 1503 Pfam Myosin head (motor domain) 71 452 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo09g1492 1503 ProSiteProfiles IQ motif profile. 751 780 IPR000048 GO:0005515
Amo09g1492 1503 ProSiteProfiles IQ motif profile. 774 803 IPR000048 GO:0005515
Amo09g1492 1503 SMART MYSc_2a 64 701 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo09g1492 1503 Pfam DIL domain 1322 1425 IPR002710 -
Amo09g1492 1503 Pfam Myosin N-terminal SH3-like domain 16 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Amo09g1492 1503 CDD MYSc_Myo11 83 688 IPR036018 -
Amo09g1492 1503 Gene3D - 753 800 - -
Amo09g1492 1503 Gene3D - 702 752 - -
Amo09g1492 1503 Gene3D - 801 850 - -
Amo09g1492 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 753 IPR027417 -
Amo09g1492 1503 ProSiteProfiles Dilute domain profile. 1133 1446 IPR002710 -
Amo09g1492 1503 SMART DIL_2 1321 1428 IPR002710 -
Amo09g1492 1503 ProSiteProfiles IQ motif profile. 799 826 IPR000048 GO:0005515
Amo09g1492 1503 ProSiteProfiles IQ motif profile. 726 755 IPR000048 GO:0005515
Amo09g1492 1503 CDD MyosinXI_CBD 1084 1469 IPR037975 GO:0007015
Amo09g1492 1503 ProSiteProfiles Myosin motor domain profile. 69 700 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo09g1492 1503 Coils Coil 936 1019 - -
Amo09g1492 1503 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 15 64 IPR004009 GO:0003774|GO:0005524|GO:0016459
Amo09g1492 1503 MobiDBLite consensus disorder prediction 1049 1069 - -
Amo09g1492 1503 ProSiteProfiles IQ motif profile. 703 730 IPR000048 GO:0005515
Amo09g1492 1503 PANTHER MYOSIN 12 452 - -
Amo09g1492 1503 PANTHER MYOSIN 469 1500 - -
Amo09g1492 1503 Gene3D - 635 701 - -
Amo09g1492 1503 Coils Coil 880 918 - -
Amo09g1492 1503 ProSiteProfiles IQ motif profile. 822 851 IPR000048 GO:0005515
Amo09g1492 1503 Gene3D Myosin VI head, motor domain, U50 subdomain 319 429 - -
Amo09g1492 1503 Gene3D Myosin VI head, motor domain, U50 subdomain 536 569 - -
Amo09g1492 1503 PRINTS Myosin heavy chain signature 203 230 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo09g1492 1503 PRINTS Myosin heavy chain signature 99 118 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo09g1492 1503 PRINTS Myosin heavy chain signature 436 464 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo09g1492 1503 PRINTS Myosin heavy chain signature 156 181 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo09g1492 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 753 851 IPR027417 -
Amo09g1492 1503 Gene3D - 471 591 - -
Amo09g1492 1503 PANTHER MYOSIN-9 469 1500 - -
Amo09g1492 1503 PANTHER MYOSIN-9 12 452 - -
Amo09g1492 1503 MobiDBLite consensus disorder prediction 1032 1085 - -
Amo09g1492 1503 Gene3D Kinesin motor domain 72 445 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1492 Amo-Chr9 53803376 53816342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1492 8 1500 Myosins gene family AT1G54560 78.762 0.0 2505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1492 K10357 - gmx:100816792 2589.3