Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1484 ATGTCCTCCACCAACGTTGTTGTTCTATACAACGGCGGCGGCCTCATCAAAGCCGGCTTCGGCGTTGAACACGACCCCGCCGTCATTCTCCCTAACTGCCTCTACCGCTCCCCCTCCTCCAAAAAATGGCTTCACCCACACCCTCTTCACACCACAACTACTTCCACCGATTCCACTGCCGCCGAGCTGGACTTCACCTCCGCCGCCGTCCGGCGCCCCTTGGACCGCGGATACCTAATAAACTCCGATCTGCAACGAGAAATCTGGTCGCACCTCTTCTCGTCAATCCTGCGCATAAACCCAACTCAGTCCTCCCTTCTCATCACTGAACCCTTGTTCACTCTTCCCTCCATTCAGCGCTCACTGGACGAGCTCATTTTCGAATATTTCAATTTTAGGGCACTGTACGTGGCCGATTCCCCCTCGCTGGTGCACCTGTACAAAGCAAGCCGCAGGCCCAACGGGCTTGTGTCTCGGGCCCAGTGCAGCCTCGTTGTTGATTGCGGGTTCTCTTTCACTCATGCTTTGCCTGTGTTTCAGAATTTCACGCTGAATTATGGTGTTAAGAGAATCGATTTGGGTGGGAAGGCGCTTACTAATTACCTGAAGGAGCTTGTTTCGTTTCGGTCTGTTAATGTGATGGAGGAGACCTTCCTCATTGACGATGTCAAAGAGAAGCTCTGTTTCGTCTCCTTTGATGTGCCGCGCGATCTCCGCCTTGCCAGGGAAAGTGGAAAAGAAAATCTCTTCAGGGGCACATATGTGATTCCCGATGGTATCACATACACCAAGGGTTTTGTTAAGCATCCAGAGCGAATACACAACTATCTTGCCTTGAAGGATTGCACTTGTGGCTTTCCTCCTCTTCCAGAGGAAACAAAGGGGAATATGAACCGCTTGGAAATTGCTTAG 912 0.5164 MSSTNVVVLYNGGGLIKAGFGVEHDPAVILPNCLYRSPSSKKWLHPHPLHTTTTSTDSTAAELDFTSAAVRRPLDRGYLINSDLQREIWSHLFSSILRINPTQSSLLITEPLFTLPSIQRSLDELIFEYFNFRALYVADSPSLVHLYKASRRPNGLVSRAQCSLVVDCGFSFTHALPVFQNFTLNYGVKRIDLGGKALTNYLKELVSFRSVNVMEETFLIDDVKEKLCFVSFDVPRDLRLARESGKENLFRGTYVIPDGITYTKGFVKHPERIHNYLALKDCTCGFPPLPEETKGNMNRLEIA* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1484 303 SUPERFAMILY Actin-like ATPase domain 161 266 IPR043129 -
Amo09g1484 303 SMART actin_3 4 299 IPR004000 -
Amo09g1484 303 Gene3D Actin; Chain A, domain 4 193 276 - -
Amo09g1484 303 Pfam Actin 3 263 IPR004000 -
Amo09g1484 303 Gene3D - 1 174 - -
Amo09g1484 303 PANTHER ACTIN-RELATED PROTEIN 6 7 274 IPR030054 GO:0005634|GO:0006338
Amo09g1484 303 PANTHER ACTIN 7 274 IPR004000 -
Amo09g1484 303 SUPERFAMILY Actin-like ATPase domain 3 156 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1484 Amo-Chr9 53329606 53331074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1484 7 265 Cytoskeleton Gene Families AT1G49240 28.030 2.20e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1484 K11662 - gmx:100819827 415.231