Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1483 ATGCCTCAAGACCGAAACAGAATTGATCTATCGAAAAATGAATTTGACTTGACAAATGAACGGTTTCTTGTCCCTGAGATGATCTTCCAACCTGCCAATTTGGGTATGAATGAAGCTGGGCTAGCAGAATGTATTGTTCGAGCTGTCAATTCGTGCCATCCACATCTCCACCCTGTACTCTATGAAAGCATAATTTTAACGGGCGGAAGCACACTGTTTCCTCAGTTTTCTGAGAGATTAGAGAAGGAGCTCCGACCACTAGTTCCCGATGACTATCATGTGAAGATAACTACTCAAGAAGATCCCATACTAGGTGTTTGGCGTGGAGGATCTCTGTTGGCGTCAAGTCCAGATTTTGAAGCAATGTGTGTAACTAAGTCTGAGTATGAGGAGCTTGGTTCTGTTAGATGTCGCAAGAGATTCTTTCATTAA 432 0.4282 MPQDRNRIDLSKNEFDLTNERFLVPEMIFQPANLGMNEAGLAECIVRAVNSCHPHLHPVLYESIILTGGSTLFPQFSERLEKELRPLVPDDYHVKITTQEDPILGVWRGGSLLASSPDFEAMCVTKSEYEELGSVRCRKRFFH* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1483 143 Pfam Actin 13 142 IPR004000 -
Amo09g1483 143 Gene3D - 106 133 - -
Amo09g1483 143 PANTHER ACTIN-RELATED PROTEIN 6 12 138 IPR030054 GO:0005634|GO:0006338
Amo09g1483 143 Gene3D - 39 105 - -
Amo09g1483 143 Gene3D Actin; Chain A, domain 4 12 38 - -
Amo09g1483 143 PANTHER ACTIN 12 138 IPR004000 -
Amo09g1483 143 SUPERFAMILY Actin-like ATPase domain 13 142 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1483 Amo-Chr9 53328608 53329605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1483 17 141 Cytoskeleton Gene Families AT3G12110 38.095 3.16e-26 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1483 K11662 - nnu:104586108 275.789