Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1454 ATGCACACTCACTTGATTCTAGTGCTCTTCTTGTACTGTTGCATTGGCTTCTCTGTTACTTTTTCTGAGWGAGCTCAAGCTCAAGCMGCATCAGATGATGAATTGTCCACTCTGCTAGCGATGAAGTCGAGTCTCGTTGATTCGAGGAATCATCTGAAGGATTGGCAGATACCAAGCAATGCAACACAGTCTGCAGCAAGTTCAATAATACATTGTAATTGGACTGGAGTTTTTTGCAACTCTAGAGGCTTGGTAGAAGGTCTTGATCTCTCCAACATGAATCTTAGCGGCCGTGTATCYGATGGAATCCAATTCCTTTCAAGCTTGTCTTATTTCAACATAAGCTGCAACAGTTTCGCTSCATCATTGCCAAAGTCACTGTCCAACCTCACCTCAATGAAGACCTTTGATGTGAGCCAGAACTTCTTCACTGGCAGCTTTCCCAGTGGTCTTGGAAGAGCTGCAGAATTGAGATCAATTAATGCGTCAAGCAATGACTTCTCAGGGCTTCTTCCTGAGGATATTGGAAACGCGACAATGCTCGAGAGCCTCGACTTTCGCGGGAGCTACTTTGTAAGTCCAATTCCCAAGAGTTTCACAAATTTGCAGAAGCTCAAATTTCTTGGCCTTTCAGGCAATAACTTCAAAGGGGAGATTCCGGATTATCTCGGTGAACTTTCTTCTCTGGAGACATTAATTATGGGATACAATGAGTTCAAAGGTGAGATCCCAGCGGAGTTTGGGAATCTGACCAATCTTCAATACCTTGATTTGGCTGTAGGCACTCTCAGTGGACAAATACCACCTGAATTGGGTAAGCTGAAAAATCTTACGACAGTTTACTTATACAGAAACAACTTCACTGGAAAAATTCCGCCTCAACTTGGCAGCATAATGTCACTAGCATTTTTGGATCTATCTGACAATCAAATCTCAGGAGAGATTCCAGAAGAACTTACTAATTTGGAAAAGCTGCAGCTTCTGAATTTGATGAGCAATAAAGTTACTGGTCTAGTACCGAATAAGCTTGGCGAATTGAAGAATTTGCAGGTGCTTGAGTTGTGGAAGAATTCTTTAGAAGGTCCTTTGCCTGTTAACCTTGGAAAGAACTCTCCATTGCAGTGGTTGGATGTGTCCTCTAACTCGTTATCTGGGGAGATCCCACCAGGTTTGTGTACTACAGGCAATCTCACAAAACTAATCCTCTTCAACAATTCCTTCTCTGGTCCCATTCCAACTGGACTTCCAAATTGTTTGTCCTTGGTTCGTGTTCGGGTTCAGAACAATCTTATTTCCGGGACTATTCCGGTCGGCTTTGGAAACCTTCCGGCCCTTCAACGGCTGGAGTTGGCAAAGAACAATCTCACTGGCCAAATTCCTATAGACATTACCTTATCCTCATCTCTCTCTTTCATTGATGTATCATGGAACCACCTTCAATCTTCTCTACCTTCTGAGATTCTCTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCACAACAGCTTCAGAGGCAATTTCCCAGATGAGTTTCAGGACTGTCCCTCTCTCTCTGTTTTGGATCTTTCAAACACCGAACTCTCTGGAAAAATCCCAGAAAGTATTGCTTCGTGTCAAAGATTGGTGAACCTTAACCTTAGAAACAACCAATTGACAGGTGGAATCCCCAAATCAATCACAAACATGCCAACCTTATCTGTTCTTGATCTGTCCAACAATTCACTCACAGGTGAAATACCTGAAAACTTCGGCATTTCCCCGGCCCTCGAAACGCTGAACCTCTCCTACAACAAGCTCGAGGGTCCAGTACCATCAAATGGCATCTTAATGTCCATAAATCCTAATGATCTTGTAGGCAACCCTGGTCTCTGTGGCAGCAGCATTCTCCCTCCATGTTCTCAGAATTTCACTGTCACAACCCATCAAAAACCTGGCAAGCACACCAAACACATCATCATCGGTTTCTTGACCGGCATTTCAGTGATCATTTCCATTGCTGCAGCATACTTAGCTGGCAGATTTATATACAACAGAACCTACTTGTACAACAATTTCATCCATGATTGGTTCAAAAGTAGCAATGAAGATTGGCCATGGAGACTAGTAGCATTCCAAAGGGTGAGTTTCACAAGCACCGAGATCCTAACTTGCATAAAGGAGTCAAATGTCATAGGAATGGGAGCCACCGGCATTGTTTACAAAGCCGAAATCCATAACAGACCGCACATGACAGTCGCTGTTAAGAAGCTCTGGAGATCAGGATCAGACATAGAGAATGGCTACAGTGATGTGGTAAGAGAAGTGGAGCTCTTAGGGAAACTAAGGCACAGGAACATTGTGAGACTATTGGGGTATGTGCATAATGAGAGAGATGTTATAATGGTTTATGAGTACATGGCTAATGGGAACTTGGGGAACGCACTGCATAGTGGTGAACAATGTGAGAGGTTGCTTGTGGATTGGGTTTCAAGGTACAACATTGCTCTTGGTGTTGCTCAAGGGCTTCACTATCTTCACCATGATTGCCATCCACCTGTTATTCATAGGGATATTAAGTCCAATAATATACTTCTTGATGCAAATTTGGAGGCGCGGATCGCGGATTTCGGCTTGGCGAAGATGATGATCCATAAGAATGAGACTGTTTCAATCGTGGCTGGATCATATGGTTACATTGCACCAGAATATGGATATACCCTGAAGGTGGACGAGAAGATTGARATATATAGTTATGGTGTGGTGCTTTTGGAGCTAGTAACTGGAAAAATGCCATTAGACCCTTCGTTTGGAGAATATGTWGACATAGTGGAGTGGATAAGAAAWAAGAYGAGCAACAAAGCACTGGAAGAAGCACTAGACCCAAGCATAGCTGGTCAGTGCAAGCACGTCCAAGAAGAGATGCTTCTTGTGCTGAGAATAGCACTCCTATGCACTGTGAAGCTTCCCAAGGAAAGGCCATCCGTGAAGGATGTTATCACAATGCTCGGAGAGGCGAAGCCGAGGAGGAAGAGCGTCTGCCGTGATAGCAGGGCCCAAGATGGTGCCCTGGAAAAGCCAATATTTACTGCATCGCCGGTAGTAAGCCTTCTGTAG 3093 0.4387 MHTHLILVLFLYCCIGFSVTFSEXAQAQAASDDELSTLLAMKSSLVDSRNHLKDWQIPSNATQSAASSIIHCNWTGVFCNSRGLVEGLDLSNMNLSGRVSDGIQFLSSLSYFNISCNSFAXSLPKSLSNLTSMKTFDVSQNFFTGSFPSGLGRAAELRSINASSNDFSGLLPEDIGNATMLESLDFRGSYFVSPIPKSFTNLQKLKFLGLSGNNFKGEIPDYLGELSSLETLIMGYNEFKGEIPAEFGNLTNLQYLDLAVGTLSGQIPPELGKLKNLTTVYLYRNNFTGKIPPQLGSIMSLAFLDLSDNQISGEIPEELTNLEKLQLLNLMSNKVTGLVPNKLGELKNLQVLELWKNSLEGPLPVNLGKNSPLQWLDVSSNSLSGEIPPGLCTTGNLTKLILFNNSFSGPIPTGLPNCLSLVRVRVQNNLISGTIPVGFGNLPALQRLELAKNNLTGQIPIDITLSSSLSFIDVSWNHLQSSLPSEILSIPTLQTFIASHNSFRGNFPDEFQDCPSLSVLDLSNTELSGKIPESIASCQRLVNLNLRNNQLTGGIPKSITNMPTLSVLDLSNNSLTGEIPENFGISPALETLNLSYNKLEGPVPSNGILMSINPNDLVGNPGLCGSSILPPCSQNFTVTTHQKPGKHTKHIIIGFLTGISVIISIAAAYLAGRFIYNRTYLYNNFIHDWFKSSNEDWPWRLVAFQRVSFTSTEILTCIKESNVIGMGATGIVYKAEIHNRPHMTVAVKKLWRSGSDIENGYSDVVREVELLGKLRHRNIVRLLGYVHNERDVIMVYEYMANGNLGNALHSGEQCERLLVDWVSRYNIALGVAQGLHYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIHKNETVSIVAGSYGYIAPEYGYTLKVDEKIEIYSYGVVLLELVTGKMPLDPSFGEYVDIVEWIRXKXSNKALEEALDPSIAGQCKHVQEEMLLVLRIALLCTVKLPKERPSVKDVITMLGEAKPRRKSVCRDSRAQDGALEKPIFTASPVVSLL* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1454 1030 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 11 1012 - -
Amo09g1454 1030 Gene3D Ribonuclease Inhibitor 33 155 IPR032675 -
Amo09g1454 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Amo09g1454 1030 Gene3D Phosphorylase Kinase; domain 1 717 802 - -
Amo09g1454 1030 ProSiteProfiles Protein kinase domain profile. 718 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1454 1030 Gene3D Transferase(Phosphotransferase) domain 1 803 1016 - -
Amo09g1454 1030 Gene3D Ribonuclease Inhibitor 531 636 IPR032675 -
Amo09g1454 1030 Pfam Leucine rich repeat 540 599 IPR001611 GO:0005515
Amo09g1454 1030 SUPERFAMILY Protein kinase-like (PK-like) 709 995 IPR011009 -
Amo09g1454 1030 PANTHER UNNAMED PRODUCT 11 1012 - -
Amo09g1454 1030 Gene3D Ribonuclease Inhibitor 156 248 IPR032675 -
Amo09g1454 1030 Gene3D Ribonuclease Inhibitor 249 329 IPR032675 -
Amo09g1454 1030 Gene3D Ribonuclease Inhibitor 439 530 IPR032675 -
Amo09g1454 1030 Pfam Protein kinase domain 720 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1454 1030 ProSitePatterns Protein kinases ATP-binding region signature. 724 749 IPR017441 GO:0005524
Amo09g1454 1030 PRINTS Leucine-rich repeat signature 301 314 - -
Amo09g1454 1030 PRINTS Leucine-rich repeat signature 562 575 - -
Amo09g1454 1030 Gene3D Ribonuclease Inhibitor 330 438 IPR032675 -
Amo09g1454 1030 SUPERFAMILY RNI-like 263 606 - -
Amo09g1454 1030 Pfam Leucine rich repeat N-terminal domain 32 80 IPR013210 -
Amo09g1454 1030 SMART serkin_6 718 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1454 1030 SUPERFAMILY L domain-like 71 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1454 Amo-Chr9 51432872 51436377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1454 8 1030 Receptor kinase-like Gene Family AT1G08590 63.934 0.0 1282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo09g1454 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1454 - - gmx:100793873 1609.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1978 19 69306279 69310084 Amo09g1454 09 51432872 51436377 hybridization