Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1451 ATGGGTTTCGAAGAACAGTTACTTAGTATGTATGACATGAGGATTGAAGCTAATGAAACTATAGCTGAATGTCAAGGAAAGGAAGATCCGATTTTTCATGAATTGAACGGAGTGGAAGGTCTCCAAGTAGAAGATATCCTTCAAATGAAATTTTGTACTCCTGAAGAAGCACGGTGTTTTTATAACAGCTATAGCCGAATGAAGGGATTTGCCACGAGACAGGGGAAAGAGGTACCGAATAAGGCCGGAGAGATCGTTAGGTATACGTTCGTGTGCAACAGGCAAGAGTTTCGTGATAAGAAATGGTTGGAGGTGGCTGATCGAAAGAGGGAGCACAAGGTAGTGACTTGTTGTGGCTGCTTAGCTGAGATGAGAATTAAGCAAAAAGATGGCAGTGGCAAGTGGTACGTGTCTCGGTTTTTGGACAACCATAACCATGAGCTCATAGCTGGGAAGTATGTCGACTATTTGAGGTCGCATAGGGTGCTATCTGATGTTGAAATTGCTCATCTGACTAGCTTGAGGGAGGTGGATATCGGGAAACTCTTAGGAGATGTGTTCGAGTTAAGATTTGCCACTGCGATGTTAGTGACAGCAGGGAAGTGTACATCCTTCAAAAATATAGAAGGCACGAGCGAACCTGGGAGACTTGGTCGGGTAGCATGTCTCAGTGATGACGACTTCAAGGATTACTCAAAGAAGATACTCAATGATGCCCTCCGATTGGAGATGAAGCACGGGCTAAGAATAGCGGAGGAAACCATTGTTTTTGTCTCTGATGTTGGCATGAAGGACCCCATTCGTGCCGAGCAGAGCCATCCGGATGGCAAAGATGCCGCCCCCTGA 846 0.4563 MGFEEQLLSMYDMRIEANETIAECQGKEDPIFHELNGVEGLQVEDILQMKFCTPEEARCFYNSYSRMKGFATRQGKEVPNKAGEIVRYTFVCNRQEFRDKKWLEVADRKREHKVVTCCGCLAEMRIKQKDGSGKWYVSRFLDNHNHELIAGKYVDYLRSHRVLSDVEIAHLTSLREVDIGKLLGDVFELRFATAMLVTAGKCTSFKNIEGTSEPGRLGRVACLSDDDFKDYSKKILNDALRLEMKHGLRIAEETIVFVSDVGMKDPIRAEQSHPDGKDAAP* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1451 281 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 35 172 - -
Amo09g1451 281 Pfam FAR1 DNA-binding domain 60 149 IPR004330 -
Amo09g1451 281 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 35 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1451 Amo-Chr9 51302996 51305737 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g1451 FAR1 4e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1451 - - aip:107620408 234.187