Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1435 ATAGATTATCTATTACATTATCTTATATATGTAGGTTTTCTTCTGCTGTCTTGTGTGAAGATTTTTGTTTCTCTCTTCTTTTTTTTTCTTGTTCTTTCTAGGTCACATTCTGCTGAAATTGAAAAAATTGTCAAAACAGTGACCAAGATATTGAGTCCCAGACCATCATCGAGTCTATCTAATGATATAGTAGTTGGGATGGAGTTCTCTCTACAAGAACTAGGGAAGCTTCTAGTTTTGGACTCAGATGATGATGTTCGAGTTGTAGGGATTTGTGGAATGGGTGGTATAGGAAAAACAACTCTTGCTTGCAGATTATATGAAAAAATCTCTCATCAATATGATGTTTCATGCTTTATGGATGATGTAAGTAAAACATATAGAGATTGTGGTTCACTTGGTATGAAAAAGCAGCTTCTTTGTCCAGCTTTCATGGAAGAAGATTCTCYAATATGCAATATTTTAATGGCAGATAATTTGATTWAAAATATGTTACACKATAGAAAGGTTCTWATAGTTTTGGATAATGTTGATCAGAGAATTCAGTTGGAGAAGTTGGCTTTAAAACGGGAATGGTTAGGTAGAGGGAGTAGAATAATCATAGTTTCTAGAGATGAGCATATATTGAGAGAGTATGGAGCGGACCACGTTTACAAAGTTCAACTCTTAAATGATGAGAATGCTCTCCAATTGTTTTGCAGAAAAGCTTTCAAATGTAATCATGTTGCAAAAGATTATGAAAGCCTGACAGATTCTGCATTAGCATATGCTAATGGACTTCCTTTAGCAATTAAAGTATTGGGCTCATTTTTGTTTGGGCGAGATGTCTCTGAATGGAGTAGTGCATTGGTTAGACTGAAAGAAACTCCAACAAAAGATATTATGGATGTACTTCGAATCAGTTTTGATGGACTTGAGGATGACGAAAAAGACATATTTCTTGATATTGCCTGTTTTTTCCCCAATGACATTGAAAAGTATGTAAAAGATATTTTACGTATTCGAGGATTCCATCCTGATAATGGTATAAAAGTTCTCATTGAAAAATCCCTCATAACCCGTGATCGGTGGAAGATCACTATGCACGATTTGTTGAGAGACTTGGGAAGAAGTATTGTTCGGGAAAAATCACCCAAAAAACCGAGAAAGTGGAGCAGGTTATGGAATCACAAGGATCTAAGCAATGTCTTGCGAGAAAACAAGCCAGCAGAGAATGTTGAAGCCGTAGTTTTGCCAACAAATGATGAAATAAGAGAAGATCGCCTAAAGTTACTCAAACTTGGCCAAGTGAAAGTGAATTTCCCAGGCAGGCTGCATTTTCTTTCTAATGAGTTGGGATATCTTTCTTGGAAAGAATATCCTTTCACATGTTTGCCATCAAGCTTTCAACCAACTCAACTCGTTAAATTAATCCTACGTTATAGTAACGTCAAAGAACTCTGGGAGGGAATAAAGGATCTACATAAATTGACACATTTAGAGCTATGTTATTCCAAAAGTCTTGTAAAGATATCAAATTTATCTCAGGCCCCAAATCTTTCGCACATAAATCTTAAAGGATGTGTGAAACTTGTTCACCTTGATACATCCATTGGTGGTCTAGAAAAGCTTAGTTTGTTGAATCTGGAAAACTGCAAAAGTCTTGTTAGTATTCCGAGCAATGTATTTGGTCTTAGATCTCTTTGTGATTTAAATTTATCTGGCTGTTCGAAATTAATTGGATATCGGTTGTTAGAGAGCGAGCAAAGTGTGGCATCCTCCATATGCAAAGCTCTTACAAGGCCTCTCAATTTTTTGTCTTCTAGATGGCGTGCCAATTCAGTTGGTTTATTGGTGCCTTCTTTGTCTCATTTCCCTTTGGTAACTCTTGACATAAGTTTTTGTAATCTAGTTAAAATCCCTGATGCTATTGGACTGTTACGTTGTTTAGAAGATTTAAACATAGGGGGAAACAATATTGTTACACTACCTCATTCCATCAATGAACTTCCCAAGCTAAGGCGGTTGAACTTGCAGTACTGTAAGCAACTAAAGTGGTTGCCTAGCAACCTTTTGCCGTTAGGAGGTACCAGTGGAAGAGTTCACTATGCAGGAATATATGGAGCAATATGTGTTTTCAACTGCCCTAATTTGAGTGACAACGTAGGTTGTTGTCTCGCAGTTATTTCATGGATGATAAAAATGATTCAGGTGAACATGCAATCCTCTTCACCTAGATGCGTCATTCAAGTTGTTATTCCAGGAACTGAAATTCCAAGGTGGTTCAACAATCAGAATGAGGGTAGTTCAATGAAGCTGGATCCATCTCCCATTCTGAATGACAATAATCGGATTATTGGCATTGCTTGTTGTGTGACATTTGTTGTACATGATACTCCAACTCAATTGCCTGAAGAACCCAAACATGCTGGTGATATTGGATGCGGTTTTCGTCTTCGCTCTGGGGGAACTTATTTTGCGCTTCCAATACGTCTTAAGAAAGATTTTATCACAACTGAATTAGATCATATGTTGCTAATATTTTTCTCCCGGGACAAGATCATTGATCATTATACAAGTCATTTAAAAGAGGGAAGATGTGCTCTTGATGGTATTGAATTGGCCACCTCGAGTGAATATCCAGAAGAAATAATACAAGTGAAGAGTTGTGGTTACCGTTGGGTATGTAAGGAAGATCTGGAACAATTAAACCCAACAATGATGCATAGCGCCGATTCTTCAACTCAGAATAAGAAGCGCAATAATCCTTATTGCATTCATATTCACAGTTATCCAATGGAATGCGTGAGAATCCAAAGCACCTTGTCTCACAGCCACAGGAGGAATTGGAAATATGATGTGTTTGTGAGCTTCAGAGGCGAGACTCGCTTCAACTTCACCGATCATCTTTATGCTGCTCTCCGCAAACACGGCATAGTTGCCTTCAGGGATGACACTAAGCTCGAGAAAGGAGGACCTATATCAGCAGGGCTTCTGGAAGCTATTGAAGGATCACAGGTTCTGATTGTCGTCTTCTCTATCAACTATGCTTCCTCTACATGGTGCTTGCAAGAACTCGCAAGCATAGCTGATTGCATTCAAATCCCAGGACACACTGTTCTGCCACTTTTCTATGATGTGAGTCCAACTGAGGTGAGAAGGCAAAGTAGAAATTTTGAAAAAGCATTTATGAAACATGAAGAAAGATTCAAAGATGATGCAGAGATGATGGAGCAAGTGGCAAGATGGAGGGGAGCTCTAACACAAGTAGCCAATCTCTCTGGCTGGGATCTCAAGGATAAGTCACTATCTGCTGAGATTGAAAAAATTGTCAAAGCGGTAACAAACATATTGAGTCCCAAACCATCATCAAGTCTATCTAATGATGTAGTTGGGATGTACTCCCATTTAGAAGAACTAGAAAAGCTTCTAGTTTTGGACTCACATGATGATGTTCGAGTTTTAGGCATTTGTGGAATGGGTGGCATAGGAAAGTCAACTCTTGCCACCATTTTATATGAAAAAATCTCTCATCAATACGACATTTCATGCTTTATGGATGATGTAAGCAAAACTTATGCAGATTGTGGTCCACTTGGTGTGAAAAAGCAACTTCTTTGTCAAGCTTTCATGGAAGAAGAATTTCTACTATGCAATCTTTCGGCAGCAACTAATTTGATTCAAAAATATTTATGCCATAGAAAGGTTCTCATAGTTCTGGATAATGTTGATCAGGGGATTCAGTTGGAGAATTTGGCTTTAAAACGGGAATGGCTAAGTAGAGGGAGCAGAATAATCATAGTTTCTAGAGATGAACATATATTGAGAGAGCATGGAGTGGATGATGTTTACAAAGTTCAACTCTTAAATGATGAGAATGCTCTCCAATTATTTTGTAGAAAAGCTTTCAAATGTAACCATGTAATAGAAGGTTATGAAAGCCTGACAAATTCTGCATTAACATATGCTAATGGACTGCCATTAGCAATTAAAGTATTGGGTTCTTTTTTGTTTGGCCGAAGTATATCCGAATGGAGTAGTGCTTTGGTTAGATTGAGAGAAAACCCAACAAAAGATATTATGGATGTGTTACGAATAAGTTATGATGGACTTGAGGATATGGAAAAGGAAATGTTTCTTGATATTGCATGTTTTTTCTCTAACGAGGATGAATATTATGTAAAGAATATTTTATGTATTCGAGGGTTTCATCCTGATATTGGTATAAGAATTCTCATTGATAAATCACTCGTAACTATTGTTGATGGATGGAAGATAGTTATGCATGATCTGTTGAGAGAGTTGGGTAGAAGTATTGTTCGAGAAAAATCACCCAAAGAGCCAAGAAAGTGGAGCAGGTTATGGAATCAAAAGGATCTAAGCAATGTCTTGCGGGAAAACAAGATAGCAGAAAATCTTGAAGCCATAGTTCTACCAAGATTTCTTGAAATTAGGGAAGAGTTATCAGTTGAAGCTTTATCACAAATGAGCTGCCTTAAATTACTCATACTCAGAGAAGTGAATTTTTCGGGATGCCTTAATTTTCTTTCTAATGAGTTGGGTTATCTTGAATGGAAAGAATATCCTTTCACATGTTTGCCACCAAGCTTTCAGCCAAATAAACTCGTTAAATTAATCCTGCATCACAGCAACATCATAGAACTCTGGGAGGGAATAAAGGATCTACATAATTTGACACACATGGAACTATGTTATTCCAAAAGCCTTGTAAAGATACCAAATTTATCTCAGGCCCCAAATCTTTTGCGACTAGATCTTAAAGGATGTGTTAAACTTGTTCGCCTTCATCCATCCATTGGCTGTTTAAAAAACCTCGGTTACTTGAATCTGGAAAACTGTAGAAGTCTTGTTAGTATTCCCAACAACATATTTGATCTTAATTCTCTTTATGATTTAAATCTATCTGGCTGTTGGAAATTACTTAAAGATCAGTTGTYAGAGMAACCAAGGCAAAGCAAGCAGTTGAATACAGGTCAAAGTGTACAAAGGCACATGACATCCTCCATATGCAAAACTCTTACAAGGCCTCTCCATTTTTTGTCTTCTAGAAGATGCTCCAATTCAATTGGTTTGTTGGTTCCTTCTTTGTCTCGTTTCCCAGCTTTGGTATCTCTTGACATAAGTTTCTGTAATCTAGTTGAAATTCCTGATGCTATTAGACAGTTATGTTGTTTAGAACGTTTAAACATAGGGGGGAACAATATTGTTACGCTTCCTCATTGCATTAAGGAACTTCCCAAGCTAAGGGAGTTGAACTTGCAGTACTGTAAGCAACTAAAGTGGTTGCCAAGTACCCTTTTGCCCATAGGAGGAGGTAGCAATGGAAGACTTTACTATGGAGGAATATTTCTGTTCAACTGCCCCAATTTGAGTGACACAGAAAGTTGTGGTGTCACAGTTATTTCATGGATGATAAAAATGATTCAGGTGAACATGCAATTCTCTTTCCCCAGATGTTCCATTAAAGTTATTATTCCAGGAACTGAAATTCCAAGGTGGTTCAACAAACAGAATACAGGTAATTCAATGAAGGTGGATCCATCTCCCATATTGAATGACAATAATTGGATTGGCATTGCTTGTTGTGTGGCATTTGTTGTACATGATGCTCCAACTGAATATCCTCCTATTCTATTTGGTTGTGGTTTTCGTCGTAATCCAGATAAGGCCGTTTGTTCCGTTGCTCCAATACGTCTTAAGAAAGATTGGATCACAACTGAATCAGATCATATGTTGTTAATGTTTTTATCCAGGGAAGTTTTCATAAATAATTTTGTAAGTGTTTTAAAAGAAGGAGTATCTGATCTTGATGGTATTGAATTGGTTGCATTGACTCGTTATCCAGAAGAAGTAGTAGAAGTGAAGAGTTGTGGGTACCGTTGGGTATTTAAGGAAGATTTGGAACATTTAAACCCAGAGAAAATGTATAGCTCCAACTCTTTAGCTCACAATCGTAAGCACAAGTTTTTGGAAATTCAAGATGACCAATAG 5991 0.3736 IDYLLHYLIYVGFLLLSCVKIFVSLFFFFLVLSRSHSAEIEKIVKTVTKILSPRPSSSLSNDIVVGMEFSLQELGKLLVLDSDDDVRVVGICGMGGIGKTTLACRLYEKISHQYDVSCFMDDVSKTYRDCGSLGMKKQLLCPAFMEEDSXICNILMADNLIXNMLHXRKVLIVLDNVDQRIQLEKLALKREWLGRGSRIIIVSRDEHILREYGADHVYKVQLLNDENALQLFCRKAFKCNHVAKDYESLTDSALAYANGLPLAIKVLGSFLFGRDVSEWSSALVRLKETPTKDIMDVLRISFDGLEDDEKDIFLDIACFFPNDIEKYVKDILRIRGFHPDNGIKVLIEKSLITRDRWKITMHDLLRDLGRSIVREKSPKKPRKWSRLWNHKDLSNVLRENKPAENVEAVVLPTNDEIREDRLKLLKLGQVKVNFPGRLHFLSNELGYLSWKEYPFTCLPSSFQPTQLVKLILRYSNVKELWEGIKDLHKLTHLELCYSKSLVKISNLSQAPNLSHINLKGCVKLVHLDTSIGGLEKLSLLNLENCKSLVSIPSNVFGLRSLCDLNLSGCSKLIGYRLLESEQSVASSICKALTRPLNFLSSRWRANSVGLLVPSLSHFPLVTLDISFCNLVKIPDAIGLLRCLEDLNIGGNNIVTLPHSINELPKLRRLNLQYCKQLKWLPSNLLPLGGTSGRVHYAGIYGAICVFNCPNLSDNVGCCLAVISWMIKMIQVNMQSSSPRCVIQVVIPGTEIPRWFNNQNEGSSMKLDPSPILNDNNRIIGIACCVTFVVHDTPTQLPEEPKHAGDIGCGFRLRSGGTYFALPIRLKKDFITTELDHMLLIFFSRDKIIDHYTSHLKEGRCALDGIELATSSEYPEEIIQVKSCGYRWVCKEDLEQLNPTMMHSADSSTQNKKRNNPYCIHIHSYPMECVRIQSTLSHSHRRNWKYDVFVSFRGETRFNFTDHLYAALRKHGIVAFRDDTKLEKGGPISAGLLEAIEGSQVLIVVFSINYASSTWCLQELASIADCIQIPGHTVLPLFYDVSPTEVRRQSRNFEKAFMKHEERFKDDAEMMEQVARWRGALTQVANLSGWDLKDKSLSAEIEKIVKAVTNILSPKPSSSLSNDVVGMYSHLEELEKLLVLDSHDDVRVLGICGMGGIGKSTLATILYEKISHQYDISCFMDDVSKTYADCGPLGVKKQLLCQAFMEEEFLLCNLSAATNLIQKYLCHRKVLIVLDNVDQGIQLENLALKREWLSRGSRIIIVSRDEHILREHGVDDVYKVQLLNDENALQLFCRKAFKCNHVIEGYESLTNSALTYANGLPLAIKVLGSFLFGRSISEWSSALVRLRENPTKDIMDVLRISYDGLEDMEKEMFLDIACFFSNEDEYYVKNILCIRGFHPDIGIRILIDKSLVTIVDGWKIVMHDLLRELGRSIVREKSPKEPRKWSRLWNQKDLSNVLRENKIAENLEAIVLPRFLEIREELSVEALSQMSCLKLLILREVNFSGCLNFLSNELGYLEWKEYPFTCLPPSFQPNKLVKLILHHSNIIELWEGIKDLHNLTHMELCYSKSLVKIPNLSQAPNLLRLDLKGCVKLVRLHPSIGCLKNLGYLNLENCRSLVSIPNNIFDLNSLYDLNLSGCWKLLKDQLXEXPRQSKQLNTGQSVQRHMTSSICKTLTRPLHFLSSRRCSNSIGLLVPSLSRFPALVSLDISFCNLVEIPDAIRQLCCLERLNIGGNNIVTLPHCIKELPKLRELNLQYCKQLKWLPSTLLPIGGGSNGRLYYGGIFLFNCPNLSDTESCGVTVISWMIKMIQVNMQFSFPRCSIKVIIPGTEIPRWFNKQNTGNSMKVDPSPILNDNNWIGIACCVAFVVHDAPTEYPPILFGCGFRRNPDKAVCSVAPIRLKKDWITTESDHMLLMFLSREVFINNFVSVLKEGVSDLDGIELVALTRYPEEVVEVKSCGYRWVFKEDLEHLNPEKMYSSNSLAHNRKHKFLEIQDDQ* 1997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1435 1996 Gene3D Ribonuclease Inhibitor 1450 1646 IPR032675 -
Amo09g1435 1996 SUPERFAMILY Toll/Interleukin receptor TIR domain 935 1089 IPR035897 -
Amo09g1435 1996 Pfam Leucine rich repeat 620 674 IPR001611 GO:0005515
Amo09g1435 1996 Pfam Leucine rich repeat 1700 1756 IPR001611 GO:0005515
Amo09g1435 1996 ProSiteProfiles TIR domain profile. 943 1111 IPR000157 GO:0007165
Amo09g1435 1996 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 616 849 - -
Amo09g1435 1996 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 616 849 IPR044974 GO:0006952
Amo09g1435 1996 Pfam C-JID domain 1825 1968 IPR045344 -
Amo09g1435 1996 Pfam C-JID domain 746 893 IPR045344 -
Amo09g1435 1996 Pfam NB-ARC domain 79 292 IPR002182 GO:0043531
Amo09g1435 1996 Pfam NB-ARC domain 1130 1351 IPR002182 GO:0043531
Amo09g1435 1996 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 316 IPR027417 -
Amo09g1435 1996 Gene3D - 1112 1276 IPR027417 -
Amo09g1435 1996 Pfam TIR domain 944 1120 IPR000157 GO:0007165
Amo09g1435 1996 Pfam Leucine Rich Repeat 466 485 IPR011713 -
Amo09g1435 1996 PRINTS Disease resistance protein signature 88 103 - -
Amo09g1435 1996 PRINTS Disease resistance protein signature 532 548 - -
Amo09g1435 1996 PRINTS Disease resistance protein signature 164 178 - -
Amo09g1435 1996 PRINTS Disease resistance protein signature 257 271 - -
Amo09g1435 1996 Gene3D - 1281 1365 IPR042197 -
Amo09g1435 1996 Gene3D - 222 306 IPR042197 -
Amo09g1435 1996 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1109 1375 IPR027417 -
Amo09g1435 1996 Gene3D - 51 216 IPR027417 -
Amo09g1435 1996 SMART LRR_typ_2 1602 1626 IPR003591 -
Amo09g1435 1996 SMART LRR_typ_2 1699 1721 IPR003591 -
Amo09g1435 1996 SMART LRR_typ_2 534 558 IPR003591 -
Amo09g1435 1996 SMART LRR_typ_2 1722 1745 IPR003591 -
Amo09g1435 1996 SMART LRR_typ_2 640 663 IPR003591 -
Amo09g1435 1996 SMART till_3 944 1086 IPR000157 GO:0007165
Amo09g1435 1996 SUPERFAMILY L domain-like 361 684 - -
Amo09g1435 1996 Gene3D - 938 1111 IPR035897 -
Amo09g1435 1996 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 60 577 - -
Amo09g1435 1996 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 577 IPR044974 GO:0006952
Amo09g1435 1996 SUPERFAMILY L domain-like 1421 1766 - -
Amo09g1435 1996 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1117 1966 IPR044974 GO:0006952
Amo09g1435 1996 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1117 1966 - -
Amo09g1435 1996 Gene3D Ribonuclease Inhibitor 421 585 IPR032675 -
Amo09g1435 1996 Gene3D Ribonuclease Inhibitor 1647 1794 IPR032675 -
Amo09g1435 1996 Gene3D Ribonuclease Inhibitor 586 713 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1435 Amo-Chr9 50082857 50091335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1435 29 669 WRKY Transcription Factor Family AT4G12020 32.743 1.13e-70 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1435 - - adu:107476580 1258.82