Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1421 ATGCCTACTATTGTTGGAATGGCACCGAAAAACCAGGATGCCATTGATGCTGCTATTGTTGGAATGCTTGCAGATCCTAAAGAGATCATGAACTTGTGTAATCTAAGGGATGATGCTAAGAAGAAGGTTCATGCCATTATTGATAAGTTCGCCGAAAGAGGCCTTCGTTCCCTAGCCATTTCAAGACAGTTCCTTCTTGGCCAAGACAAAGATGCAAGTATCGCCACACTTCTCTGGAGTAGATAG 246 0.435 MPTIVGMAPKNQDAIDAAIVGMLADPKEIMNLCNLRDDAKKKVHAIIDKFAERGLRSLAISRQFLLGQDKDASIATLLWSR* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1421 81 PANTHER CALCIUM-TRANSPORTING ATPASE 26 73 - -
Amo09g1421 81 PANTHER PLASMA MEMBRANE ATPASE 10 28 - -
Amo09g1421 81 Gene3D - 25 78 IPR023299 GO:0000166
Amo09g1421 81 PANTHER CALCIUM-TRANSPORTING ATPASE 10 28 - -
Amo09g1421 81 PANTHER PLASMA MEMBRANE ATPASE 26 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1421 Amo-Chr9 48590991 48592470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1421 10 72 Primary Pumps ATPases AT2G24520 44.231 1.71e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1421 K01535 - adu:107465528 119.012