LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo09g1421	ATGCCTACTATTGTTGGAATGGCACCGAAAAACCAGGATGCCATTGATGCTGCTATTGTTGGAATGCTTGCAGATCCTAAAGAGATCATGAACTTGTGTAATCTAAGGGATGATGCTAAGAAGAAGGTTCATGCCATTATTGATAAGTTCGCCGAAAGAGGCCTTCGTTCCCTAGCCATTTCAAGACAGTTCCTTCTTGGCCAAGACAAAGATGCAAGTATCGCCACACTTCTCTGGAGTAGATAG	246	0.435	MPTIVGMAPKNQDAIDAAIVGMLADPKEIMNLCNLRDDAKKKVHAIIDKFAERGLRSLAISRQFLLGQDKDASIATLLWSR*	82

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo09g1421	81	PANTHER	CALCIUM-TRANSPORTING ATPASE	26	73	-	-
	Amo09g1421	81	PANTHER	PLASMA MEMBRANE ATPASE	10	28	-	-
	Amo09g1421	81	Gene3D	-	25	78	IPR023299	GO:0000166
	Amo09g1421	81	PANTHER	CALCIUM-TRANSPORTING ATPASE	10	28	-	-
	Amo09g1421	81	PANTHER	PLASMA MEMBRANE ATPASE	26	73	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo09g1421	Amo-Chr9	48590991	48592470	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo09g1421	10	72	Primary Pumps ATPases	AT2G24520	44.231	1.71e-20	82.0

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo09g1421	K01535		-	adu:107465528	119.012

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