Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1379 GTCTTGAAATTCTTGATGGAAAGGAATAGTGTTAATGCCCTTCATGGTCAGGTTACAAGTGGAACACTGATTCTGCAGGATTGTGTTGTTAGTTTACTCTTTGCATTGCTTCCAGTATTGGGTGGAACATCAGGTGTTCTTCAGGGAGTAACATACATGACTAAATCCAAGAACCCTGCTTTGTATGGTGAACTTGCCAAAGGACAAGCCCCCAAATTCATGGTGTTTGCTTGCTCTGATTCAAGAGTGTGCCCATCTCATGTGTTAGATTTCCAGCCCAGTGAGGCCTTTGTGGTTACAAATGTTGCTAACATTGTCCCACCATATGACCATACAAAATACGCTGGAGCTGGTTCTGCTATTGAGTATGCAGTTCTGCATCACTATTCTCTTCCACCCTAA 402 0.4303 VLKFLMERNSVNALHGQVTSGTLILQDCVVSLLFALLPVLGGTSGVLQGVTYMTKSKNPALYGELAKGQAPKFMVFACSDSRVCPSHVLDFQPSEAFVVTNVANIVPPYDHTKYAGAGSAIEYAVLHHYSLPP* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1379 133 Gene3D Carbonic anhydrase 44 129 IPR036874 GO:0004089|GO:0008270
Amo09g1379 133 PANTHER CARBONIC ANHYDRASE 53 127 IPR001765 GO:0004089|GO:0008270
Amo09g1379 133 Pfam Carbonic anhydrase 74 127 IPR001765 GO:0004089|GO:0008270
Amo09g1379 133 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 53 127 - -
Amo09g1379 133 SUPERFAMILY beta-carbonic anhydrase, cab 56 127 IPR036874 GO:0004089|GO:0008270
Amo09g1379 133 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 78 85 IPR015892 GO:0004089|GO:0008270|GO:0015976
Amo09g1379 133 SMART Pro_CA_2 66 132 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1379 Amo-Chr9 42023155 42024780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1379 1 56 Antiporters AT2G19600 83.929 5.43e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1379 K01673 - egr:104419257 140.198