Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1365 ATGTCTCTTCTATTAAGACGACCGCCAGGTCGCAAAGCTTATCCGAGAGATGTTTTTTATTTGCATTCACATCTTTTGGAAAGAGCCGCTAAATCAAGTTCTCAGTTAGGTGAAGGAAGTATGACTGCTTTGCCAATAGTTGAGACCCAATCGGGAGATGTTTCGGCTTATATTCCTACAAATGTGATTTCTATTACAGATGGCCAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATCAGACCTGCGATTAATGTGGGTATTTCGGTTTTCAGAGTTGGATATGCGGCTCAAATTAAAGCCATGAAACAAGTAGCTGGTAAATTAAAATTGGAATTGGCGCAATTTGCGGAATTAGAAGCTTTTGCACAATTTGCTTCTGATCTCGATAAAGCTACTCAAAATCAATTGGCAAGAGCTCCTCTCACTGTAAGGAAATTTCTCCTTGAATTACGTGCTTACTTAAAAATGAATAAACCTCAATTCCAAGAAATAATATCTTCTATAAAGACATTCACTGGAGAAGCAGAAGCCCTTTTAAAGGAGGCTATTCAGGAACAAATGGAAATCTTTTTACTCCAGGAACAAGTAGAAAAAAATGATTAA 609 0.3744 MSLLLRRPPGRKAYPRDVFYLHSHLLERAAKSSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVFRVGYAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARAPLTVRKFLLELRAYLKMNKPQFQEIISSIKTFTGEAEALLKEAIQEQMEIFLLQEQVEKND* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1365 202 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 91 IPR000194 GO:0005524
Amo09g1365 202 Gene3D - 144 193 IPR038376 -
Amo09g1365 202 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 1 141 - -
Amo09g1365 202 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 145 197 - -
Amo09g1365 202 Gene3D - 100 143 IPR038376 -
Amo09g1365 202 Gene3D - 1 99 IPR027417 -
Amo09g1365 202 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 145 197 - -
Amo09g1365 202 CDD ATP-synt_F1_alpha_C 103 192 IPR000793 GO:0015986
Amo09g1365 202 Pfam ATP synthase alpha/beta chain, C terminal domain 99 140 IPR000793 GO:0015986
Amo09g1365 202 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 100 192 - -
Amo09g1365 202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 95 IPR027417 -
Amo09g1365 202 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1365 Amo-Chr9 40759676 40760392 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1365 9 105 Primary Pumps ATPases(2) AT4G38510 31.959 1.72e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1365 K02111 - gmx:121173224 314.309