Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1364 AGAATCTTGAAGACTATTCAAAATTCAGAAGAACTGTGGGAAGGAGCTCTTGAACAGCTAGAAAAAGCCCGGGCCCGTTTAAGGAAAGTTGAAACAGAAGCAGATCAGTTTCGAGTGAATGGTTATTCTGAAATAGAACGAGAAAATTTTAATTTAATTAAGTCAATTTATACGACTTCAGAACAATTAGAAAATTACAAAAATAAAACTATTCGTTTTGAACAACAAAGAACGATTAATCAAGTTCGACAATGGGTTTTCCAACAAGCCTTACAAGGAGCTCTGGGAACATTGAATAGTTGCCTGAACAACGAGTTACATTTACATAAAATTAGTAAAATTATCCGCGAACGTATTGAACAATATAATACCGAAGTAAAGATTGTAAATACTGGTATGTACTTCAATAATGGTGGGGAGTTAGTGGAATTTGAGGAGGGTACCATAGGAATTGCTTTAAATTTGGAATCAAATAATGTTGGTGTTGTATTAATGGGTGATGGTTTGATGATACAAGAGGGAAGCTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGCTTATTTGGGTCGTGTTATAAATGCCTTGGCTAAACCAATTGACGGTCGAGGAGAAATTTCATCTTCCGAATCTCGATTAATCGAATCTCCAGCTTCCGGCATTATTTCAAGACGTTCCGTATATGAGCCTCTTCAAACAGGACTTATTGGTATTGATTCAATGATCCCTATAGGGCATGGTCAGCGAGAATTAATTATTGGGGACAGACAAATAGGTAAGACAGCAGTAGCTACAGATACGATTCTCAATCAACAAGGACAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCATCCTCTGTGGCTCAAGTGGTGACCACTTTACAAGAAAGGGGAGCAATGGAATACACTATTATAGTAGCTGAAACTGCGGATTCTCCAGCTATATTACAATATCTCGCTTCGTATACGGGAGCAGCTCTGGCTGAATTTTTTATGTACCGCGAACGCCACATTTTAATTATTTATGACGATCCCTCCAAA 1062 0.3748 RILKTIQNSEELWEGALEQLEKARARLRKVETEADQFRVNGYSEIERENFNLIKSIYTTSEQLENYKNKTIRFEQQRTINQVRQWVFQQALQGALGTLNSCLNNELHLHKISKIIRERIEQYNTEVKIVNTGMYFNNGGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESRLIESPASGIISRRSVYEPLQTGLIGIDSMIPIGHGQRELIIGDRQIGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIIVAETADSPAILQYLASYTGAALAEFFMYRERHILIIYDDPSK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1364 354 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 106 354 - -
Amo09g1364 354 CDD ATP-synt_F1_alpha_N 139 182 - -
Amo09g1364 354 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 353 IPR027417 -
Amo09g1364 354 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 106 354 - -
Amo09g1364 354 Coils Coil 3 40 - -
Amo09g1364 354 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 241 353 IPR000194 GO:0005524
Amo09g1364 354 Pfam ATP synthase B/B' CF(0) 2 98 IPR002146 GO:0015078|GO:0015986|GO:0045263
Amo09g1364 354 Pfam ATP synthase alpha/beta family, beta-barrel domain 139 181 IPR004100 GO:0046034|GO:1902600
Amo09g1364 354 Gene3D - 131 182 IPR023366 -
Amo09g1364 354 Gene3D - 183 354 IPR027417 -
Amo09g1364 354 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 113 183 IPR036121 GO:0046034|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1364 Amo-Chr9 40758403 40759654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1364 175 353 Primary Pumps ATPases(2) AT4G38510 28.934 1.17e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1364 K02111 - vvi:4025114 418.698