Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1340 TCGAGCTCAGCGCGTCAGTTCCTGYTATTCATCTGCTTCATCGCGCTCRTGCCGCCGTCCGTCGGGCGCTCAGTCACCATCGTCTTCGTCTGGTCGTCGCAGATTCTTCCAACCACCACCAAGGGAAAGCTGCTAGATTGGCCAAAGCYTTTTCGTATTATCAATGGGATTGCCAGAGGTCTTCTTTATCTTCGTCAAGATTCAAGACATTTAATAGTTCATAGAGATCTCAAGGCTGGAAATGTTTTGTTAGATGATGAATTGGATCCTAAAATCTCGGACTGTGGAAGAGCAAGAAGCTTTGTAGGAAATGAAAGCGAAGCAAATACAAGACATATTTACATAGTTGGTGGGTTGTACTCAACAAAATCTGATGTCTATAGTTTTGGTTGCTTAGAAATAGTTGATGCATCGATCAGAGACTCAATTAATTTGCCAGAAGTCATAAGAACAATTCATGTCGGTTTACTATGTGTGCAACAAAATCCAAAAGATCGACCAAGCATGTCATATCCAAAGAAGCCAGGGTTCTTTATTGAGAGAGATGTGGTTGGTGACCATTCTACATTAAGCAACAATGAACTCACGGATCTCAACATTAAGCTCAAAGATGATATTGATAATTGGCCAATTCAACTTACAATAAATGACATTTCTCATAACAGTAGCAAAATGCTTCAAATGAAATTTAGTACTACTGTGGAGTGCTTGAATAGGAGTACTTGTAACTATGATTCAGGGATGGTGTTGAATGTTGATATATTTTTTTTATAA 774 0.3915 SSSARQFLLFICFIALXPPSVGRSVTIVFVWSSQILPTTTKGKLLDWPKXFRIINGIARGLLYLRQDSRHLIVHRDLKAGNVLLDDELDPKISDCGRARSFVGNESEANTRHIYIVGGLYSTKSDVYSFGCLEIVDASIRDSINLPEVIRTIHVGLLCVQQNPKDRPSMSYPKKPGFFIERDVVGDHSTLSNNELTDLNIKLKDDIDNWPIQLTINDISHNSSKMLQMKFSTTVECLNRSTCNYDSGMVLNVDIFFL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1340 257 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1340 257 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 131 171 - -
Amo09g1340 257 Pfam Protein tyrosine and serine/threonine kinase 44 132 IPR001245 GO:0004672|GO:0006468
Amo09g1340 257 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Amo09g1340 257 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 40 135 - -
Amo09g1340 257 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 131 171 - -
Amo09g1340 257 Gene3D Transferase(Phosphotransferase) domain 1 34 174 - -
Amo09g1340 257 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 40 135 - -
Amo09g1340 257 SUPERFAMILY Protein kinase-like (PK-like) 40 170 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1340 Amo-Chr9 39462870 39464692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1340 45 179 Receptor kinase-like Gene Family AT4G23290 42.857 2.17e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo09g1340 PK_Tyr_Ser-Thr 1.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1340 - - ahf:112722120 351.288