Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1305 ATGGAGATGCCTCAGGGGTTTAGGGTTTGTCACTTCCTTCATCCGTTCCTTGCGGCATCATTCACGTCGTCTTCTCTATTCTCCATTAGCGTCACGGCATCTTCTCTCTTCTTCGCCGCAAGCGTCGCGTCGTTTACTCTTTTCTCCATCGTGAGCGTCGCGTCTTGTCATCTTCTTCTATGGACTTGTTCGTCTTCTCCACCGATAACATCCCTGGATCAAAGATTCGCAGTAAAGATTGACTTCAGGGTAGTTTTGGCTTGCATGGCCTTCCTGCAGCTCGAGAGGTCCAACCAATCAAACGTATTGGAGGCAAGAGCTGGGTATTATGAAAAGCCAATTGCTACAATAGATTTTGCATCACTATATCCATCTATTATGATGGCCTATAATTTATGTTATTGTACCCTGGTGACTCCTGAAGATGTTCGGAAACTTAATCTCCCTCCAGAATCAGTGAACAAAACTCCATCTGGGGAAACATTTGTTAAATCAAATTTGCAGAAGGCTAGTATTGGAATGGATAACTTGAACGCTTAA 540 0.4407 MEMPQGFRVCHFLHPFLAASFTSSSLFSISVTASSLFFAASVASFTLFSIVSVASCHLLLWTCSSSPPITSLDQRFAVKIDFRVVLACMAFLQLERSNQSNVLEARAGYYEKPIATIDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPESVNKTPSGETFVKSNLQKASIGMDNLNA* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1305 179 Gene3D Palm domain of DNA polymerase 102 176 IPR023211 -
Amo09g1305 179 Coils Coil 174 179 - -
Amo09g1305 179 Pfam DNA polymerase family B 100 170 IPR006134 GO:0000166|GO:0003677
Amo09g1305 179 SUPERFAMILY DNA/RNA polymerases 102 165 IPR043502 -
Amo09g1305 179 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 97 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1305 Amo-Chr9 37273478 37275739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1305 100 170 Core DNA Replication Machinery Family AT5G63960 85.915 7.81e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1305 K02327 - adu:107465568 194.897