Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1301 ATGCTGTTGCGATTGCCGCACGAGTCACCCTCCGACAAGACTTACCAGCTTTGCCGAGCGCTGATGATGGTGGCGGTTCCTTTGGTACTCGTCACGATTGTGCTTTATGTGTTGCCTTCCATTTCCTCCAACGAGTCTATCGAAGACTACACCCTCACGCACCATAGGATTTTGCCCGATAACAGAGCCTCTAGCTTCTACGCCATCTTCTTCGATGCTGGAAGCCATATTCATGTTTTCCACTTCAATCGCAATTTTGACCTTGTTCACATTGGCAAAGATCTCGAGCTATTGGTTCAGGTTCTTGCTTTCAATGGTAAGCCTATGAAGAATTTGAAGAGCTTGGCCACCATGGTTGAGAACTGTGATGATGAGTTTCTAAAGTTTGATCTGGAATACCAACAGGCAAACTATTTTATTGATGAGAAAAATTACATTCTGATGGATGTGAAAAAAGAAAAGGAGATAGGCTTTAGCATGCCTGTGTGTCTGGCTCAAGCAAGACAAACACCACTCTTGAAGGGTAATAGAGTCTACATCACACCTCAAGTTAAACCTAATAAGAAAGTGGTTGCAACCTTGTGA 585 0.4376 MLLRLPHESPSDKTYQLCRALMMVAVPLVLVTIVLYVLPSISSNESIEDYTLTHHRILPDNRASSFYAIFFDAGSHIHVFHFNRNFDLVHIGKDLELLVQVLAFNGKPMKNLKSLATMVENCDDEFLKFDLEYQQANYFIDEKNYILMDVKKEKEIGFSMPVCLAQARQTPLLKGNRVYITPQVKPNKKVVATL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1301 194 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 134 194 - -
Amo09g1301 194 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 134 194 - -
Amo09g1301 194 Pfam PDZ domain 99 151 IPR041517 -
Amo09g1301 194 Gene3D - 89 157 IPR046449 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1301 Amo-Chr9 37031392 37033085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1301 7 123 Calmodulin-binding Proteins AT3G04080 33.065 1.48e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1301 - K20780 aip:107618952 136.346