Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1274 ATGTTCCATTATGACCTCCTCGACGAGAAACAGAACAAGCTCGATTACATCCTCTTTCTCACTGTCGAGAACTTCCTCGAGCATCGCCTCCATATTCTCGTCTTCAAATCCGGCATGGCCAAGTCCATCCATCAGTGCATATTAGCTTGGTTCAAATTATTACGACATGATCAAATCAAAGTTGCTGTTGTATACATTTTGCTTTCTCAATTTAACATTGCAAATCCCACCACTGGATGCCAAAGGAAGCTCGAGATTGATGATTATCAGAAGCTGCGAGCATTTTGGAACAAGAAAATCTCACAAGAGGTTCTTGGTGATGCTTTGCAATTCAAATACCACGTCTACAAAATCACTGGTGGTTGTGACAAACAGAAATTTCCAATGAAGCAGGGAGTATTGACCACTGGTTGCGTTCGCCACTTGCTCCATAGAGAGCATTCATTCAAGTCTTGTTTTCTATATTTTAATTCTTCCATATTCAATAACCTCTCTGATTTGAACTTGGTAATTGTGAAAAGGGATGACAATGATTTATCAGGCCTGATAGACATTGAAAAAACAAGAATGAAGGGTCCAACGAGAACCTCCAAAAGAGAGAAGCAAATGAGGAAATTGGGTTGGACCCTAAATTTGTCAATGTTGTTACTGTTCTTGAACCATTCTTGTCTAAGGACCACATTGAGGTGGAAGCCACTTACACCAGATTTAGTGGCAGATGAGACGGTATCTTCGGGGTCATTTCTAGAGGCTGGACAGACTTTGCTAGCCTGTGCAAATTCAAACCTGGAGGTGTTGGGGTGTTCGAGGTCATCTCAATTGAGCCCGTCACAATACTGCAGGTCCGATGTCGCAATGAAGCTAGAAGCTGATCAATCTTACTATCCTTTTCTTTATTAA 900 0.4144 MFHYDLLDEKQNKLDYILFLTVENFLEHRLHILVFKSGMAKSIHQCILAWFKLLRHDQIKVAVVYILLSQFNIANPTTGCQRKLEIDDYQKLRAFWNKKISQEVLGDALQFKYHVYKITGGCDKQKFPMKQGVLTTGCVRHLLHREHSFKSCFLYFNSSIFNNLSDLNLVIVKRDDNDLSGLIDIEKTRMKGPTRTSKREKQMRKLGWTLNLSMLLLFLNHSCLRTTLRWKPLTPDLVADETVSSGSFLEAGQTLLACANSNLEVLGCSRSSQLSPSQYCRSDVAMKLEADQSYYPFLY* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1274 299 SMART Ribosomal_S6e_2 69 184 IPR001377 GO:0003735|GO:0005840|GO:0006412
Amo09g1274 299 Pfam Ribosomal protein S6e 70 150 IPR001377 GO:0003735|GO:0005840|GO:0006412
Amo09g1274 299 PANTHER 40S RIBOSOMAL PROTEIN S6 70 201 - -
Amo09g1274 299 PANTHER 40S RIBOSOMAL PROTEIN S6 70 201 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1274 Amo-Chr9 35543145 35545440 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1274 70 174 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 56.098 4.47e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1274 K02991 - gmx:100804076 158.303