Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1262 ATGAGTGAAAGAGGGAAAAAGGAGAAGCAAACGGAGAAAAAGGAGAGAATGAAAAACATTTTCAAGAAGCTTCACATAGGGAGCAGTAGCCACGATCCTAACCGATCCAATGAGATTCAGCCAACTGTCCCCTCGCCGTCGTGCGCCACTGATCACCGTGCTGCTGTAGCATCACAGAATACTGGCGTATCTCCGGCAAGCCCGTCGCCGTCGTCCTCTCCCTCTGCGGCACCGTCTGTCGCTCCATCTGGTGTCGGCGGCGCCGCCGCTGCGATCGTCAACCGGCAGGACTTCTTCTCGTCGGAAGAGGAGTTTCAGGTGCAGTTGGCCCTAGCAATCAGCGCTTCGAACTCGGATTTCGGTGGCGATCGCGAGAAGGATCAGATCCACGCGGCGACGCTGCTGAGTCTTGGAGGACACCGAATTGATTCGGCGAGGAGCAAGGATGAGGTTGCCGAGGCGCTGTCGAGGCAGTACTGGGATTACAATGTGCTTGACTATGAGGAAAAAGTGGTCGATGGTTTTTATGATGTTTTTGGGCTTTCTGCTGATTCTGCAATGCAAGGAAAGATGCCATCCCTAAGAGACCTCGAAACAGACCCTGGGGATTCTAGCTATGAAGTGGTCATAGTTAATCGAACAGTTGATCCTGCCTTGGAAGAGCTAGTGCAAATTGCACATTGTATTGCATTAGACTGCCCTGTCACTGAGGTTGGTATTTTGGTACAAAGGCTTGCTGAACTTGTTACAAGCCATATGGGTGGTCCTGTAAAGGATGCTAGTATTATGTTGGCAAGATGGACGGAAAGGAGTACGGAATTAAGGACATCACTTTCAACAAGTTTATTGCCTATTGGGTCCTTAAATATTGGGCTCTCTAGACATCGTGCGTTGCTTTTCAAGGTATTGGCCGACAATATTAAGATGCCTTGTAGGCTGGTAAAAGGTAGTCATTATACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTAGAGGATGAAAGGGAGTTTTTGGTTGATCTTATGGCTGCTCCTGGAACCCTTATACCAGCTGATATTTCAAGTACAAAAGATAGTGCCTTTAAATCTTACAATCCAAAGGTTGTGCCAAGTTTACCTTCCTCTAATGAAATTGGGTCTTATTCAACACCTATTCCTGCTGATGAAGGTAGTAGTCAAAATTCTGTATTAAGAAATCATTCACCACCATGGAATGAAAAATTATATTTTGAAAAGCCTGAGTATGCACGACCTAGCTTGGGTTTCAGCAAAGACGCTGGTGTTGGTCCTTCTAAGATACCTAATAAAAGAAATACGGAAATTTCACCACCATACTCTGGTGCTTCTCTGTACAAAGGGACTCTTGGAATGAATGCAGTTGGTGATGGGATGAGATTAAATGTAAATGTTGTACCATATGCTCAGAACAACCCCAATGATTCTCATAGCCTTTTTGCAGATCTTAATCCATTTCAGATAAAAGGAACTGGGAAGACATCTGTGCATAATATACCTGTTGAAAATAAAGCTCCTGAGCTCCAGAGTACAAGAAAAAATACTATTCCTGGGCAACCCCCTGTACCATGGAAGAATTGTTATGCTTACAATGAAGTTTCCAGGAAAAATAATCGTAATCCTAATGACTACAGTCCTACATTATTAGTTTCTAATAATTCTTCCGTGTCTGAAAAGGTTAATCTCAGTGGTAGAAAATCACCATACAGTTCAAATGTAAATAATAACATAAATGTTCAAACTCAACCACAAGTTACTGGTTCCATGATAGCACCTGCAGCAATTGAACAGAACTGGATTCAGGATCTTAATGCTTATCACAATGGGGGACATGTGGAGCATTCTCAGAATGTCATGTCAGAGGCTTTTAAAGAACATGAAAACAGTGAAATCAGAGATATTGACTGGAGGGCGTGCACACATGACAGATTCATGGGAAGCAATTTAAAACTAAAGGAACCAGAGAGTCCTAGTTCATCAGTTGATTCTATTTCAAACAGGCCCAGGGTTGATCCAAATCCACCAATGTTGGATGATGTAGATGTTGGTGAATGCGAGATTCCATGGGAGGATCTGGTTATTGGAGAAAGAATTGGTCTAGGTTCATATGGCGAGGTATACCATGCAGACTGGAATGGCACAGAAGTTGCTGTGAAGAAATTTTTGGACCAGGATTTTTCAGGTGCTGCCTTGTCTGAATTCAAAAGAGAAGTAAGGATAATGCGTAGACTGCGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTTACCCGTCCCCCCAATCTTTCAATTATTTCAGAGTTTCTTCCAAGAGGAAGCTTGTACCGAATTCTTCACCGGCCTAATTGTCAGATTGATGAGAAACGAAGGATAAAAATGGCTCTGGATGTGGCCAGGGGAATGAATTGCTTACACACTAGCACACCAACTATTGTTCACCGTGATCTGAAGTCCCCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGTGATTTTGGTTTATCACGCCTGAAGCACAACACATTTCTATCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTCCGCAATGAACCCTCAAATGAGAAGTGTGATGTTTACAGTTTTGGGGTCATCCTGTGGGAGCTTGCGACTCTAAGGTTGCCATGGAGTGGAATGAATCCTATGCAAGTTGTTGGTGCTGTAGGTTTCCAGAACCGTAGACTTGATATTCCCAAGGAAGTTGATCCTTTAGTTGCAAGAATAATCTGGGAATGTTGGCAACAGGATCCAAATTTGCGTCCCTCTTTTGCACAGCTCACAGTGGCACTAAAATCCCTTCAGCGTCTAGTTATCCCATCTCATCAAGACCAGGTAGCATCACCTTTGCCGCAGGAGATTTCTGTAAATTCTACCCCCTGA 2940 0.4367 MSERGKKEKQTEKKERMKNIFKKLHIGSSSHDPNRSNEIQPTVPSPSCATDHRAAVASQNTGVSPASPSPSSSPSAAPSVAPSGVGGAAAAIVNRQDFFSSEEEFQVQLALAISASNSDFGGDREKDQIHAATLLSLGGHRIDSARSKDEVAEALSRQYWDYNVLDYEEKVVDGFYDVFGLSADSAMQGKMPSLRDLETDPGDSSYEVVIVNRTVDPALEELVQIAHCIALDCPVTEVGILVQRLAELVTSHMGGPVKDASIMLARWTERSTELRTSLSTSLLPIGSLNIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADISSTKDSAFKSYNPKVVPSLPSSNEIGSYSTPIPADEGSSQNSVLRNHSPPWNEKLYFEKPEYARPSLGFSKDAGVGPSKIPNKRNTEISPPYSGASLYKGTLGMNAVGDGMRLNVNVVPYAQNNPNDSHSLFADLNPFQIKGTGKTSVHNIPVENKAPELQSTRKNTIPGQPPVPWKNCYAYNEVSRKNNRNPNDYSPTLLVSNNSSVSEKVNLSGRKSPYSSNVNNNINVQTQPQVTGSMIAPAAIEQNWIQDLNAYHNGGHVEHSQNVMSEAFKEHENSEIRDIDWRACTHDRFMGSNLKLKEPESPSSSVDSISNRPRVDPNPPMLDDVDVGECEIPWEDLVIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPLVARIIWECWQQDPNLRPSFAQLTVALKSLQRLVIPSHQDQVASPLPQEISVNSTP* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1262 979 Pfam Protein tyrosine and serine/threonine kinase 699 948 IPR001245 GO:0004672|GO:0006468
Amo09g1262 979 SMART serkin_6 698 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1262 979 PRINTS Tyrosine kinase catalytic domain signature 772 785 IPR001245 GO:0004672|GO:0006468
Amo09g1262 979 PRINTS Tyrosine kinase catalytic domain signature 811 829 IPR001245 GO:0004672|GO:0006468
Amo09g1262 979 PRINTS Tyrosine kinase catalytic domain signature 877 899 IPR001245 GO:0004672|GO:0006468
Amo09g1262 979 PRINTS Tyrosine kinase catalytic domain signature 858 868 IPR001245 GO:0004672|GO:0006468
Amo09g1262 979 PRINTS Tyrosine kinase catalytic domain signature 921 943 IPR001245 GO:0004672|GO:0006468
Amo09g1262 979 Pfam Ethylene-responsive protein kinase Le-CTR1 152 350 - -
Amo09g1262 979 MobiDBLite consensus disorder prediction 1 22 - -
Amo09g1262 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Amo09g1262 979 PANTHER SERINE-THREONINE PROTEIN KINASE 89 971 - -
Amo09g1262 979 CDD STKc_MAP3K-like 704 947 - -
Amo09g1262 979 MobiDBLite consensus disorder prediction 30 79 - -
Amo09g1262 979 MobiDBLite consensus disorder prediction 658 673 - -
Amo09g1262 979 MobiDBLite consensus disorder prediction 653 682 - -
Amo09g1262 979 Gene3D Phosphorylase Kinase; domain 1 691 775 - -
Amo09g1262 979 MobiDBLite consensus disorder prediction 422 442 - -
Amo09g1262 979 Gene3D Transferase(Phosphotransferase) domain 1 777 960 - -
Amo09g1262 979 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 89 971 - -
Amo09g1262 979 MobiDBLite consensus disorder prediction 1 84 - -
Amo09g1262 979 ProSiteProfiles Protein kinase domain profile. 698 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1262 979 ProSitePatterns Protein kinases ATP-binding region signature. 704 726 IPR017441 GO:0005524
Amo09g1262 979 SUPERFAMILY Protein kinase-like (PK-like) 688 969 IPR011009 -
Amo09g1262 979 MobiDBLite consensus disorder prediction 541 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1262 Amo-Chr9 35342849 35351777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1262 17 934 MAP Kinase Kinase Kinase AT1G08720 54.622 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo09g1262 PK_Tyr_Ser-Thr 9.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1262 - - aprc:113870732 1466.83