Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1260 ATGTGGATGCTGTTTCAGGGAGGAGCACAAGTGCCTAACCAAAATGACTTCTACCTTTACAAGCCAATTAGGGGATGCAAGAGGCCACAAGGTGAGATTGGAGGAACTCCAGTGAACATGAGTGGTTGTTCTTCACTACAGCCAAGCCCACAGTCATCAGCGTTCCTAAGCCCTGTTCCTTCCTACCATGCTAGCCTAACTTCCTCATCATTCCCCAGTCCCTCTCGCATTGATCCCAACCTTCAAAACCCCTCTTCATTCCTCCTACCATTCATTCATAACATCACCTTCATCCCCACAAACCTTCCTCTTCTTAGAATATCCAATAGTGCCCCTATTACCTCTCCTCTTTCTTCCCCAACCTCTAGGGGTTCTAAAAGGAAGGAAGATTTCGAATCCCTCTCCAATGTCTCCTCTCTTAATTCGTTTTTCCAGCCTCTCTTCACGGTATCCGCCCCATCCAGCCCCTTCCGCCGCCACCAATTGGCTACTTCCACCATTCCTGAGTGTGATGAAGCTGATGCTTCCACTGTGGACTCCGGTCGCTGGCTTAGTTTTCAGACAACGACGACCTCAGCTGCTCCTCCATCGCCTACCTTCAACCTTGGGAAACCAGTAATGCAGCAGATCACTCTCCAGGGCCAGGCTGCAGAGAGAGGAAGACCATCGGATTTTGACTTTGAGAATGGTAGAGTGAAGCCATGGAAGGGTGAGAGGATACATGAGGTGGGAGTGGATGAGTTGGAACTTACTCTAGGATGTGGAAAGGCCTGA 774 0.4974 MWMLFQGGAQVPNQNDFYLYKPIRGCKRPQGEIGGTPVNMSGCSSLQPSPQSSAFLSPVPSYHASLTSSSFPSPSRIDPNLQNPSSFLLPFIHNITFIPTNLPLLRISNSAPITSPLSSPTSRGSKRKEDFESLSNVSSLNSFFQPLFTVSAPSSPFRRHQLATSTIPECDEADASTVDSGRWLSFQTTTTSAAPPSPTFNLGKPVMQQITLQGQAAERGRPSDFDFENGRVKPWKGERIHEVGVDELELTLGCGKA* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1260 257 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 24 256 IPR033264 GO:0003700|GO:0006351|GO:0009742
Amo09g1260 257 Pfam BES1/BZR1 plant transcription factor, N-terminal 24 79 IPR008540 -
Amo09g1260 257 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 24 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1260 Amo-Chr9 35116719 35118130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1260 24 257 BZR Transcription Factor Family AT1G75080 53.629 1.18e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Amo09g1260 BES1_N 1.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1260 K14503 - pop:7478010 308.145