Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1217 ATGGAGTGTAACAGGGATGAGGCATTGAGGGCTAAGGAAGTTGCTGAAAGTAAAATGCAACAGGGTGACTTTCAAGGGGCGCTCAAGTTTGCTCTGAAGGCAAAGAAAATGTATACTGATGTTGAAAACATTGCTCAGATCCTTACCATTTGCGAGGTTCACAATGCAGCACAGAACAAACTTACTGGTGGAACTGACATGGACTGGTATGCTATTCTTCAGACAGAACAATTGGCCGATGAAGCAACCATAAAGAAGCAGTATCGGAAGCTTGCGCTACTCCTTCATCCTGATAAGAACAAATTTCCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGGAAGCCAACAGAGTGTTGGGTGACCAAGCAAAACGTTCTGTGTATGACATGAAATATCAGGTCTCTGTGAAACCTGCATTCACTGCAAGAAATGTTCAAAATGCAACAAATTATCAGAACAGTTATTTTCCAAACCCCACCTTTGGTAATGGCCATCATCAGCCCGAACCACAGTTATTTTGGGCATCTTGCCCACATTGTAGTACTAAGTGCCCATACTACAAAAACATTTTGAACACAACCTTACATTGTTATAAATGTTTCAATACCTTTCATGCTTTGGAGAACCAGAATGTCTCACCAGGGTATACGGGGGCAGCATTTACTATCCATAAGGAAGCTCGAAAGAAGGGTGCCCGAAAACCTGCTTCAAAAAGTAATGGTGGAGGAAATGCAGAGAACTCCGTGCCAGTGTCTATGAAGAAATGTGCTGCTAATGGAGTTGGTGGGCATCATAAAGGTAGAAAGAGTAATGATGGCTCTGCGGCTAGAGGGCAACCAAAGCGCAATGTTTCTGCATCTAAAGGGACCAAAACAACTGAATCACAGCACCCAACAAATGTTGGAAGTAAGAGAGTGAGACAGTCAGCACCAGATCGAAGAGAAAATTTCAACTATTGCAATGGCAAAGGCAAAGCAGATGCAAACGTTCAGGAGAATGGTGTTGATCCTTCTACACTTAATGCTAGGAGATCTTCTAGGCAAAGGGTGCATGTTTCATATGTTGAAACCGATGATGATGATGATTTGGAGAGCTCTTCCAAAAAACAACAGCACAATGAATCTTTTGACACCAATGGATTTGTCAAAAAGGAAGAGCCTGCAGGTGGAGGGTTGTCCAATAACAGTAATCCTGCTAGTTCTGCTGCTGGGGTAACCGATCAGAATGGAAAGGTGAGAAGTGAAGTTTGTGATCCACCTGAAGAAGCATTTTCACAGAACAAAAGCAAAATTGGGCACTCTCATATTCAAAGGGAGATGTCCAATGCAGATCCTGGTCTTAGAACCTCAAAAGAGGACCACTGCTCTCCATTTAATTCAAATGGCCCGTCTGATGTGGAGTACATTATTTGTCCTGATGCAGAATTCAATAATTTTGAGAAGCACAAGGCCGAGGAATGTTTTGCTGTTAATCAATTCTGGGCTATTTATGATCCTGCTGATGCTATGCCAAGATTTTATGCTCTCATAAAGAAAGTGTTCTCCCCTTTCAAGCTTGTGATTACTTGGTTAGAACCTGACCCAGGTAATGAAAGTGAGATTGATTGGCATAATGCAGATTTGCCTGTTGCTTGTGGTAAGTTCAGACTTTGTGGTTCTCAGAATACTACAGATGCTTGTATGTTTTCTCACCAAATAGGCTGTTTGAAAGGAAGTGCCAGAGGTTCTTATCTGATATATCCCAAGAAGGGAGAAACCTGGGCAATTTTCATGGATTGGGATATCAAATGGAGTTCAAATCCAGAAGATCATTCAAATTATAAATTCGATTTTGTGGAAATCCTATCAGATTTCACTGAAAATGTTGGCACTGAAGTTGCTTTTCTCAGTAAAGTTCAAGGATTTATCAGCGTCTTTCAGAAAAATGAGAATGGAAAGAACACATTTTCCATTCCACCTAATGAGTTATATCGGTTCTCGCATCAAATTCCTTCATGCAAGATGACTGGTAGTGAAAGGGAAGGTGTTCCTAGAGGTTCTTTTGAACTTGATCCTGCTGCCGTTCCTCTTGATCTCCTTGGGAGGTCGTGA 2091 0.4175 MECNRDEALRAKEVAESKMQQGDFQGALKFALKAKKMYTDVENIAQILTICEVHNAAQNKLTGGTDMDWYAILQTEQLADEATIKKQYRKLALLLHPDKNKFPGAEAAFKLIGEANRVLGDQAKRSVYDMKYQVSVKPAFTARNVQNATNYQNSYFPNPTFGNGHHQPEPQLFWASCPHCSTKCPYYKNILNTTLHCYKCFNTFHALENQNVSPGYTGAAFTIHKEARKKGARKPASKSNGGGNAENSVPVSMKKCAANGVGGHHKGRKSNDGSAARGQPKRNVSASKGTKTTESQHPTNVGSKRVRQSAPDRRENFNYCNGKGKADANVQENGVDPSTLNARRSSRQRVHVSYVETDDDDDLESSSKKQQHNESFDTNGFVKKEEPAGGGLSNNSNPASSAAGVTDQNGKVRSEVCDPPEEAFSQNKSKIGHSHIQREMSNADPGLRTSKEDHCSPFNSNGPSDVEYIICPDAEFNNFEKHKAEECFAVNQFWAIYDPADAMPRFYALIKKVFSPFKLVITWLEPDPGNESEIDWHNADLPVACGKFRLCGSQNTTDACMFSHQIGCLKGSARGSYLIYPKKGETWAIFMDWDIKWSSNPEDHSNYKFDFVEILSDFTENVGTEVAFLSKVQGFISVFQKNENGKNTFSIPPNELYRFSHQIPSCKMTGSEREGVPRGSFELDPAAVPLDLLGRS* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1217 696 MobiDBLite consensus disorder prediction 276 306 - -
Amo09g1217 696 CDD DnaJ 68 121 IPR001623 -
Amo09g1217 696 Pfam Domain of unknown function (DUF3444) 469 672 IPR024593 -
Amo09g1217 696 SMART dnaj_3 67 124 IPR001623 -
Amo09g1217 696 MobiDBLite consensus disorder prediction 227 428 - -
Amo09g1217 696 SUPERFAMILY Chaperone J-domain 65 133 IPR036869 -
Amo09g1217 696 PRINTS DnaJ domain signature 70 88 IPR001623 -
Amo09g1217 696 PRINTS DnaJ domain signature 104 124 IPR001623 -
Amo09g1217 696 PRINTS DnaJ domain signature 88 103 IPR001623 -
Amo09g1217 696 PRINTS DnaJ domain signature 124 143 IPR001623 -
Amo09g1217 696 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 692 - -
Amo09g1217 696 Gene3D DnaJ domain 53 154 IPR036869 -
Amo09g1217 696 MobiDBLite consensus disorder prediction 349 371 - -
Amo09g1217 696 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Amo09g1217 696 MobiDBLite consensus disorder prediction 390 408 - -
Amo09g1217 696 Pfam DnaJ domain 68 129 IPR001623 -
Amo09g1217 696 MobiDBLite consensus disorder prediction 332 348 - -
Amo09g1217 696 PANTHER - 1 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1217 Amo-Chr9 32994262 32998002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1217 4 218 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.579 3.98e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1217 - - aprc:113873604 780.4