Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1213 ATGAATGAATCAACTTCAAATCAGTTGAATGAGTGCGATTTGGATTATTCTTCCGAAATGCATCAATTTGATGAGACCAGCTGTGTTGTGGATGATAGATTTGTCCTAAAGGTGGGGATGATTTTCGAGACACTAGAAGAAGCTGCAAAGTTCTATAAACATTATTCCAAACTTGCCAGTTTTTCTACCAAAATAAGGAACACGACTCGGGATGGAGACAAAATTAAGAATCAACTAATTGTATGTACCAGAGAGGTGAGGTGGAAATCCAAGATATCTCCAACTCTGAAAACAAACCCCTCAACTGGGTTAAATTGTCCAACCAGGATTTATGTACACATAATGAAGAACGTCGGTCTTTGGACAATTTCCAAAGTTGTTTTGAATTACTCACATCTTTGTTGTCCAGAACGGGTAAAGATGCTCAAACAACGCAGGGAGCTTAGCATGTTTTACAAAAGAGATAAAACCGACGAATAA 480 0.3792 MNESTSNQLNECDLDYSSEMHQFDETSCVVDDRFVLKVGMIFETLEEAAKFYKHYSKLASFSTKIRNTTRDGDKIKNQLIVCTREVRWKSKISPTLKTNPSTGLNCPTRIYVHIMKNVGLWTISKVVLNYSHLCCPERVKMLKQRRELSMFYKRDKTDE* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1213 159 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 35 150 - -
Amo09g1213 159 Pfam FAR1 DNA-binding domain 50 134 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1213 Amo-Chr9 32862088 32862812 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g1213 FAR1 1.6e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1213 - - aip:107614666 259.225