Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1180 ATGGCTAATTTGGTGACAGTGTTTGTTGTGATGGGAATTATAGTGAGTGGTTTCAGAATTGGAGCAGATGGTTTGAACATGAACTACTATTTGTTTAGTTGCCCTTTTGTTGAATCTGTTGTTAAGGACATTGTCAATAGGGCATTGGAAGATGATCCTTCACTTGCTGCTCCTCTTCTTAGAATGCACTTCCATGATTGTTTCATTCAGGTTCTTAATTTCATTTATATTTTAATCAAATGTTTGGCCAACATGGCTTTTCAGCACAAGAGATGGTGGCTCTCTCTGGTAATTAATATACATATATGGGATCATACAATAGGAGTAGCTAGGTGTTCTTCTTTCAAGAACAGGCTGACAAAAGTGGATCCAAATTTGAACTCAGAATTTGCAAAGACACTGTTCAGAACATGCAGTGATGGTGACAATGCTGAGCAGCCCTTCGACGAAACATGGGATGATTTCGACAACTTATACATCGACGCTTTGGTCTCTAACAACGGGGTTCTCGCATCTGATAAAACATTGTTCACTAAACCAAGCCTTGTTCTTCTTGGATTTCCAACAAGCCATAGTCAAAATGAGCTTGCTTGA 594 0.3906 MANLVTVFVVMGIIVSGFRIGADGLNMNYYLFSCPFVESVVKDIVNRALEDDPSLAAPLLRMHFHDCFIQVLNFIYILIKCLANMAFQHKRWWLSLVINIHIWDHTIGVARCSSFKNRLTKVDPNLNSEFAKTLFRTCSDGDNAEQPFDETWDDFDNLYIDALVSNNGVLASDKTLFTKPSLVLLGFPTSHSQNELA* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1180 197 Gene3D Peroxidase, domain 2 86 186 - -
Amo09g1180 197 SUPERFAMILY Heme-dependent peroxidases 105 184 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo09g1180 197 ProSiteProfiles Plant heme peroxidase family profile. 78 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g1180 197 ProSiteProfiles Plant heme peroxidase family profile. 24 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g1180 197 PANTHER PEROXIDASE 25-RELATED 14 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1180 197 PANTHER PEROXIDASE 47 14 74 - -
Amo09g1180 197 SUPERFAMILY Heme-dependent peroxidases 23 69 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo09g1180 197 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Amo09g1180 197 Gene3D - 25 85 - -
Amo09g1180 197 Pfam Peroxidase 105 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g1180 197 PANTHER PEROXIDASE 25-RELATED 104 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1180 197 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1180 197 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g1180 197 PANTHER PEROXIDASE 47 104 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1180 Amo-Chr9 31272168 31274155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1180 2 96 Peroxidase AT4G33420 47.368 9.50e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1180 K00430 K00428 ahf:112784653 140.198