Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1165 ATGGAGAAAGAGAAAGAAGATGAGACATCTCCAAGGGGTGTCTTAGAAGCTGAGTCAGAGCAACAAGCATCTGAATCAAATGCAAGTGGTTCAAGTAGTTCAAGCAGAGCACGCTCTCGATGGGGCAAAATTTTCAAATTGTGGAAAATTAGACCAACTAAGAATCACCTACCTTCATTACACACTCTTAGTTTCTCCAAGTTACGATGGAAGAGCAAAAGCACTAAAGAAGATACTACTACTACTCTACATACTGGTTTCTACAACTTCAGGTCTTCTTTGATCACTTTTAGCCTTTCAGAATTACAATATGCAACCAACAATTTTAGCAGCGAAAATTTAATAGGAAGAGGTGGTTTTGCTGAGGTTTATCAGGGTTGTCTTGAAGAAGGGAAACTAATAGCAGTGAAGAAATTGACGAATGGAAGCTTAGAAGAAAAGACAGCAGATTTTCTATCAGAACTTGGCGTGATTGCCCATGTTGATCATCCTAATACTGCCAAGATTATTGGATGCTGTGTCGAACGAGACATGCATCTTCTTGTCTTTTCACTTTCTCCTCTCGGAAGTTTGGGATCTCTTATTCATGGTCCAAATAAACACAAACTAGATTGGAGTAAAAGATACAAGATTGCTTTGGGAATAGCTGATGGTTTACTCTATCTACATGAGAATTGTCACAGACGGATTATTCATAGAGATATTAAAGCAGAGAATATTTTGCTCACCGAGAATTTTGACCCACAGGTACACTCCTCTCTTGTGTGTATGCATGGATTTCTTGAATAA 789 0.3853 MEKEKEDETSPRGVLEAESEQQASESNASGSSSSSRARSRWGKIFKLWKIRPTKNHLPSLHTLSFSKLRWKSKSTKEDTTTTLHTGFYNFRSSLITFSLSELQYATNNFSSENLIGRGGFAEVYQGCLEEGKLIAVKKLTNGSLEEKTADFLSELGVIAHVDHPNTAKIIGCCVERDMHLLVFSLSPLGSLGSLIHGPNKHKLDWSKRYKIALGIADGLLYLHENCHRRIIHRDIKAENILLTENFDPQVHSSLVCMHGFLE* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1165 262 Pfam Protein tyrosine and serine/threonine kinase 112 245 IPR001245 GO:0004672|GO:0006468
Amo09g1165 262 Gene3D Phosphorylase Kinase; domain 1 68 184 - -
Amo09g1165 262 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 1 252 - -
Amo09g1165 262 Gene3D Transferase(Phosphotransferase) domain 1 187 253 - -
Amo09g1165 262 SMART serkin_6 109 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1165 262 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Amo09g1165 262 ProSiteProfiles Protein kinase domain profile. 109 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1165 262 SUPERFAMILY Protein kinase-like (PK-like) 89 248 IPR011009 -
Amo09g1165 262 MobiDBLite consensus disorder prediction 15 36 - -
Amo09g1165 262 MobiDBLite consensus disorder prediction 1 36 - -
Amo09g1165 262 PANTHER OS08G0249100 PROTEIN 1 252 - -
Amo09g1165 262 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1165 Amo-Chr9 30937234 30941159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1165 63 250 Receptor kinase-like Gene Family AT1G53420 41.579 1.30e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo09g1165 PK_Tyr_Ser-Thr 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1165 - - aip:107615479 438.343