Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1164 ATTTGTGATTTCGGGCTCGCAAAATGGTTACCAGAACAGTGGACTCACTGCAACGTAACGAAAATTGGAGGCACATTTGGGTATTTTGCACCTGAATATTGCATGCATGGCATAGTAGATGAGAAAACTGATATATTTTCTTTTGGGGTCTTACTTCTGGAGATCATAAGTGGGCGTCCAGCTTTGGATGATATGCAGAAAAGCCTTGTGCTGTGGGCCAAACCTTTGCTTGAAGCTAAGAATATTGAAGCACTTGTTGATCCTTCTCTTGATGATGATTATGATAAGGACCAAGTAGGTCATGTTGTTTTCACTGCATCAAAGTGTGTTGATCAGTCTCCTATTTTAAGGCCTTGCATGAGTGAGGTTGTGACACTACTAAGAGGTCATGATAAGTGTGACTTAGAATCAAGAAAAGGTCAAAGAAAGTCGCTTCAGAGAACATACTCAGAAGAGCTACTAGATGCACAAGAATACAACTCAACAAAATATCTTAGAGATCTCAATCGACATAGACAACTTGCCTTGGGTTCTTGTGAATCTTGA 546 0.4011 ICDFGLAKWLPEQWTHCNVTKIGGTFGYFAPEYCMHGIVDEKTDIFSFGVLLLEIISGRPALDDMQKSLVLWAKPLLEAKNIEALVDPSLDDDYDKDQVGHVVFTASKCVDQSPILRPCMSEVVTLLRGHDKCDLESRKGQRKSLQRTYSEELLDAQEYNSTKYLRDLNRHRQLALGSCES* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1164 181 SUPERFAMILY Protein kinase-like (PK-like) 1 137 IPR011009 -
Amo09g1164 181 Pfam Protein tyrosine and serine/threonine kinase 1 73 IPR001245 GO:0004672|GO:0006468
Amo09g1164 181 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 1 173 - -
Amo09g1164 181 PANTHER OS08G0249100 PROTEIN 1 173 - -
Amo09g1164 181 ProSiteProfiles Protein kinase domain profile. 1 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1164 181 Gene3D Transferase(Phosphotransferase) domain 1 1 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1164 Amo-Chr9 30911572 30912498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1164 1 173 Receptor kinase-like Gene Family AT1G53420 36.158 2.42e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo09g1164 PK_Tyr_Ser-Thr 1.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1164 - - aip:107615479 369.392