Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1159 ATGGGTGGAATAGGAAAGACAACCATTGCCAAAGTGTTGTTTGCCAAACTGTTTCCTCAGTATGACAATGTGTGCTTTGTGGTGAAAGAAATCTCAGTTGATAGGCTTCTGTTCGAGCTGTTAAAGGAAGAAATTTCCACATCTAACCTGGTAGGACTCGCATTCGACATGAAGAGGCTTAATAACAAAAAGGTCCTCATTGTGCTAGATGATGTGGATAGTCTTGATCAATTGGAACATTTGTGTAGAGATTTTCGAGATCTAAGTGAAGATAGTCGACTCATCATAACTACAAGAAATAGGCAATTGCTTGCTGGAAGAGTTGATTGGATATATAAGGTTGAGAAATGGAAAGCATCTGAATCTCTACAGCTTTTTAGCCTGGAAGCCTTCAAGGAAACTCATCCTCAAAGGGGTTATGAAGATCTCGCCACAATGGCAGTTAAGTATGCTGGAGGCATTCCCTTAGCTTTGAAAGTTTTGGGTTCGTATCTTCGTTCGAAAAGTATCAAATTTTGGGAAAGTACTTTGAGAAAACTCAACAAGTATCCCAATGAGACGATTGTAAATTTGTTGAAGGTAAGCTATGATGGATTGGATGATCTAGAGAAGAAGATATTCTTGGACATTGCATTTTTTTTCAATGGAGAAGAGAAAGATCATGTCATAAGCATACTAGATGCCTGTGGATTTGAAGCAAGTAGTGGAATAGATGTTCTTGAAGATAAAGCTTTGATAACCATTTCATATAACAACACAATAGAAATGCATGAACTGCTACAAAAAATGGGTTTTGACATAGTGCGTAGAGAATGTAGCGGAGACTTTGCAAGACGAAGTCGATTGAGGGATACTGAAGTTCGTGCTGTACTTAAAGATAATAAGGGGACTGATGCAGTTGAAGGCATAACGTTAGATTTATCTCTAATCAAAGATATTCATTTGAGTGTTGACACATTCAACAAGATGAATAACATGAGATTTCTAAGATTCTATATCCCCTTGGGTCAGAGTCCTGGCCATGTGTACCTTCCAAGAGCTCTTAAGTCATTTTCCAATAAACTGAGGTACTTTGAGTGGAATGGATATCCTTTAGAGTCTCTTCCTTCAACTTTTCATGCTAAGTTGCTTGTTGAAATTCGCATGCCGCACAGTCGTGTCGAACAACTTTGGAGGGGAAAACAGGAACTTGATAATTTAGAGGGCATTGACCTAAGTGATTGCAAACATTTGATAATGCTTCCGGATTTGTCGAAGGCGTCAAGACTTAAATGGGTGAATCTATCAGGTTGTGAGAGTTTGTGTGCTCTTCATTCTTTGTCAACTATACGGCTTCGTGTTTTATTTTGA 1350 0.3852 MGGIGKTTIAKVLFAKLFPQYDNVCFVVKEISVDRLLFELLKEEISTSNLVGLAFDMKRLNNKKVLIVLDDVDSLDQLEHLCRDFRDLSEDSRLIITTRNRQLLAGRVDWIYKVEKWKASESLQLFSLEAFKETHPQRGYEDLATMAVKYAGGIPLALKVLGSYLRSKSIKFWESTLRKLNKYPNETIVNLLKVSYDGLDDLEKKIFLDIAFFFNGEEKDHVISILDACGFEASSGIDVLEDKALITISYNNTIEMHELLQKMGFDIVRRECSGDFARRSRLRDTEVRAVLKDNKGTDAVEGITLDLSLIKDIHLSVDTFNKMNNMRFLRFYIPLGQSPGHVYLPRALKSFSNKLRYFEWNGYPLESLPSTFHAKLLVEIRMPHSRVEQLWRGKQELDNLEGIDLSDCKHLIMLPDLSKASRLKWVNLSGCESLCALHSLSTIRLRVLF* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1159 449 Gene3D Ribonuclease Inhibitor 299 448 IPR032675 -
Amo09g1159 449 PANTHER NB-ARC DOMAIN PROTEIN 1 439 - -
Amo09g1159 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 210 IPR027417 -
Amo09g1159 449 Pfam NB-ARC domain 1 186 IPR002182 GO:0043531
Amo09g1159 449 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 439 IPR044974 GO:0006952
Amo09g1159 449 Gene3D - 118 200 IPR042197 -
Amo09g1159 449 Gene3D - 1 109 IPR027417 -
Amo09g1159 449 PRINTS Disease resistance protein signature 151 165 - -
Amo09g1159 449 PRINTS Disease resistance protein signature 395 411 - -
Amo09g1159 449 PRINTS Disease resistance protein signature 59 73 - -
Amo09g1159 449 SUPERFAMILY L domain-like 303 448 - -
Amo09g1159 449 CDD AAA 3 98 - -
Amo09g1159 449 Pfam Leucine Rich Repeat 377 395 IPR011713 -
Amo09g1159 449 SUPERFAMILY "Winged helix" DNA-binding domain 187 272 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1159 Amo-Chr9 30683424 30684944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1159 1 448 WRKY Transcription Factor Family AT5G45050 36.853 7.94e-73 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1159 - - adu:107465409 879.782