Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1157 ATGGAYAACTACGACGCGAAGTTTCTATGCACCTACGGAGGCGAGATCAAACGCCGCCTTAACGACACCAAGATCTCCTACGTCGGTGGCCTCAACAAGATCCTCTACGTTAACCGTGGAATCGACTTCARCGCCATGCTCGCCGAACTTTCCGCCCTCTTTGACGCCGCCGGCAACATCTGCTTCAAGTACCTACTCCCCAACGATGAACTCGATGCCCTCATCTCCGTCACCGGTGACAACGACCTGAACAACATGATGCTCGAGTATGATAATCTCTACAGAGATTCCCCTAAAARCGCTCGCATAAGGCTCTTCGTCTTCCCTGGCAACCATTTCAATTTGGATCGCAATCCCGCTTCCACCGAAACCCTAAAAACCAAGAAGACAGTCAAACAAAACTCCAAAGTCAACGGCGACAGTTTAGTTGTTGTTCTTCCGCCTCCGCCAGTTGATGTTAAAACAGAGCGGATTGATTGTTCTGATCCGACCCGATTTAATAGCCTGTTATCTGCTGCAAAGTATGATGTGTTTCTGAGCTTCAGAGGCGAAGACACACGCAACGGTTTCACTTCCCATCTTTGTAAAGCTCTGTCGCGAAAGCAGGTAAAGACCTTCGTGGATTTTACTGTTCAGAAGGGAAATGAGATCTCTGCTTCGATCCACCAAGCAATTGAAGAGTCGTTCGTATCGGTGGTTGTGTTCTCGGAGAACTATGCTTCTTCAAAGTGGTGCTTGGAAGAGCTTGTGAAAATAATGGAGTGCAGTAAAGAAAATGGACTGGTTGCTGTTCCTGTGTTCTATAAAATAGATCGATCACATGTGCGGAAGCAGCTTGGAAGTTACAGTGAYGCATTAAAGAAGTTACAYAATAATAGCARGAAGAAGGTTCAGAAATGGAGGGAAGCTCTCACTGAAGCAGCAAATTTATCTGGGTGGGTCTCCAGCTCCTGCAGGGATGAGTCTGAGCTCATTCAAAAGATTGTGAAAGACGTTTTGCAGAAGCTGATTGATCACAACCCACCGAATGATATTAAAAGTTTTGTAGGTATTGACGGAAATCTTAAAGCTATAGATTCGTCGCTAAGAGAAGTCCTTGAAGTCCAAACAAGAATGATTGGAATTTGGGGCATGGGTGGGATAGGAAAGACCACTCTAGCAAAARTTGTATTCGAGAAATACTCTTATCAGTATGAAGGTTCCTGCTTCTTGGAAYATGTTAGAGAAAGATCAGAAAAATATGGACATTCGCTATATGAATTACGCAATGAACTTTACTCAGAGTTGTTGCAGGAAAATAATTGCAAAGACAGCACAAGAAAATCCACCAATGCTAAGGAAAGGCTCCGCAGTCGAAGAATTTTCATAGTTCTTGATGATGTGAGTTGTTCAAAGCAATTAAAATACCTTGCTGGGGAGCATCWATGGTTTGGTGCAGGTAGTAAGATCATTGTCACAGCTACAGACAAGAGTGTATTTGCTCAATGGGAAGATGAAGAAATATATGAGATGAAGGTGTTAAATTCTGAGGACTCCCTTACATTGTTTAGCTTGAATGCATTCAATCAAGACCATCCGAAAATGGGATATGAAAATCTATCATGGGAAGCAGTTAAATATTGTGAAGGTTTACCATTAGCTTTGAAAGTGTTGGGTTCTTTTCTTCGTTCCAAGAGTGAAARTGAATGGGATAGTGCATTGCYAAACATCAAYAAGATTCCTGACGCACCAATTCAAAATGTATTAAGGTTGACCTATGAWGGATTAAATTATGAGGAGAGAGAAATTTTTCTAGACATTGCATGTTTTTTTAAGGGATTCCTTAAAGAACATGTAGTTAATCTGTTAGAAAATTGTGGCTTCGATGCAGCTAATGGCATGAGGTCCCTTCATGATAAGTCTCTAATAGCTATATCTGATAATTCTCTGAGGATGCATGACTTGATCCATGAAATGGCTTTGGAAATTGTTCGCAAAGAATCTATCAAAAATCCTGAATATCGTAGCCGTTTGTGGGACTATAATGATATTAGGGATGTTTTGGGAAACAACAAGGGAACRGATGCAATTGAAAGCATAATGTTAGATATGTCTCATATAGATGATCTACAGTTGAGTGCTGACACATTCAAAAAGATGTCTAGATTAAGATTGCTCAAATTGTATGACTCGTCAGAGAAGCATGGTAAATTAAGTAATCTGCAGCTTCCTATAGGGTTGAAGCCATTAAGGTACTTTGAATGGCATGCYTACCCTTTGCCGACTCTGCCATCAAACTTTTGTCCCGAGAAGCTTGTTACCCTCCGTATTCAGAACAGTCAACTTGCAAGACTATGGGATGGAAAGCAGAATCTTGTGAATTTAGAGGAAGTAGATCTAACTGGGTGCCAAAAGTTGGTTGAACTCCCAGATCTCTCTAAAGCAAAAAATCTTAAAAGTGTACAGCTGTCCAACTGTAGAAGTTTGGCCCATGTGCATCCATCTATTTTATCACTTGGCAAGCTTGAGCTTTTGGATCTATTGAATTGCATTAAGCTTGAAATGCTRGGAAACAAGAAGCATTCAAGATCTCTTAAGCACCTGTGCGTTGCTGGCTGCTCAAATTTGTTAGAATTTGCTCTATCTTCAGAAGAAATAGAATACTTGGATTTAAGCCACACTGGCATCAAAGTATTGCACCCATCTATTGGGCGTTTCACCAAAGTGAAAGAGYTATCTCTTTGTGGGATAAGACTTAAYAATCTTCCAGACGGGTTGTCTCGCTTGAAATCTCTTGAGAAACTTTCGCTCTTTAAATGTGGAAGGGTGGTTTCCAAGCAGAAATTACATGATATATTTGATGGCTTGCAATCATTGCAAAAGCTGTCTCTGGTGAACTGTGATAGTCTATTTGAACTCCCTGGAAATGTCAGCCACTTATCATCGTTACAAAAGTTACAGTTGGATGGAAGCCATGTGGASACTTTGCCTGGGAGCATCAAGCATCTTCCAAATCTGAAAACACTCTCATTAATAGGTTGTAAGATGCTTCAATATTTGCCAGAGCTTCCTCCATCCATTCGACATTTGAAGGCCCTAAACTGCACATTGCTGCAAAAAGTAGCATTTGGTTTATTTACTTATGAGCTACAAGAAGAAAAACGCGTAAGTATTTCGTTGCAGAATTGTGTGAATTTGGATGTGGAGAACTGTATTTATTCATTCCTTCAACATGTAAGAAAACAGGCATATGAATGTGAATTTAGGAGGAGAGGAGTAGGAAGAGAAAACATTGTAGTTTGGAGAAGTGACTTCTTTAAAATTTGTTACCCGGACTCCAGAGTACCAGAGTGGTTCACATATCGGGCAGTGGGGTCTTCTATTACTTTTGAAGTTGCTCCTCCTTCCAGTTACTATTTTGGTTCYCTTCTCTGCATTGTTCTCTCTTCGCACAGTTTGGATTTCGAGCTTGATATTAAATGCAGATGCTACTTGGAAGATGGAAAAATGCACAAGTATTCGCTTGGCATATTATTTTTAAGTCACGTTCCAGTGGAAGGGCATTCAGATCATGTTTATATGACGTATAACTTCAATAGAATCTTCGATGTGATCAAGCTGGACCAATTGAATAATAAGATTGCCTCCTCCGGACATAAACCAAAACTCACCTTTGAATTCTTTGTTAGCAGTGGCATGGCTCAGGGAAAAAAAGATTTAAATTTGTTGATCAAAGAGTGTGGTGTCTATCCGTTAAATGACTCCAATAAATTTGTTGATCAAAGAGTTGGAAGTTCCAATTAG 3783 0.4029 MDNYDAKFLCTYGGEIKRRLNDTKISYVGGLNKILYVNRGIDFXAMLAELSALFDAAGNICFKYLLPNDELDALISVTGDNDLNNMMLEYDNLYRDSPKXARIRLFVFPGNHFNLDRNPASTETLKTKKTVKQNSKVNGDSLVVVLPPPPVDVKTERIDCSDPTRFNSLLSAAKYDVFLSFRGEDTRNGFTSHLCKALSRKQVKTFVDFTVQKGNEISASIHQAIEESFVSVVVFSENYASSKWCLEELVKIMECSKENGLVAVPVFYKIDRSHVRKQLGSYSDALKKLHNNSXKKVQKWREALTEAANLSGWVSSSCRDESELIQKIVKDVLQKLIDHNPPNDIKSFVGIDGNLKAIDSSLREVLEVQTRMIGIWGMGGIGKTTLAKXVFEKYSYQYEGSCFLEXVRERSEKYGHSLYELRNELYSELLQENNCKDSTRKSTNAKERLRSRRIFIVLDDVSCSKQLKYLAGEHXWFGAGSKIIVTATDKSVFAQWEDEEIYEMKVLNSEDSLTLFSLNAFNQDHPKMGYENLSWEAVKYCEGLPLALKVLGSFLRSKSEXEWDSALXNINKIPDAPIQNVLRLTYXGLNYEEREIFLDIACFFKGFLKEHVVNLLENCGFDAANGMRSLHDKSLIAISDNSLRMHDLIHEMALEIVRKESIKNPEYRSRLWDYNDIRDVLGNNKGTDAIESIMLDMSHIDDLQLSADTFKKMSRLRLLKLYDSSEKHGKLSNLQLPIGLKPLRYFEWHAYPLPTLPSNFCPEKLVTLRIQNSQLARLWDGKQNLVNLEEVDLTGCQKLVELPDLSKAKNLKSVQLSNCRSLAHVHPSILSLGKLELLDLLNCIKLEMLGNKKHSRSLKHLCVAGCSNLLEFALSSEEIEYLDLSHTGIKVLHPSIGRFTKVKELSLCGIRLNNLPDGLSRLKSLEKLSLFKCGRVVSKQKLHDIFDGLQSLQKLSLVNCDSLFELPGNVSHLSSLQKLQLDGSHVXTLPGSIKHLPNLKTLSLIGCKMLQYLPELPPSIRHLKALNCTLLQKVAFGLFTYELQEEKRVSISLQNCVNLDVENCIYSFLQHVRKQAYECEFRRRGVGRENIVVWRSDFFKICYPDSRVPEWFTYRAVGSSITFEVAPPSSYYFGSLLCIVLSSHSLDFELDIKCRCYLEDGKMHKYSLGILFLSHVPVEGHSDHVYMTYNFNRIFDVIKLDQLNNKIASSGHKPKLTFEFFVSSGMAQGKKDLNLLIKECGVYPLNDSNKFVDQRVGSSN* 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1157 1260 Pfam PB1 domain 22 109 IPR000270 GO:0005515
Amo09g1157 1260 CDD PB1_UP2 9 108 - -
Amo09g1157 1260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 333 600 IPR027417 -
Amo09g1157 1260 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 167 1179 IPR044974 GO:0006952
Amo09g1157 1260 Gene3D Ribonuclease Inhibitor 678 855 IPR032675 -
Amo09g1157 1260 Gene3D Ribonuclease Inhibitor 877 1078 IPR032675 -
Amo09g1157 1260 SMART till_3 174 310 IPR000157 GO:0007165
Amo09g1157 1260 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 167 1179 - -
Amo09g1157 1260 Pfam C-JID domain 1104 1242 IPR045344 -
Amo09g1157 1260 PRINTS Disease resistance protein signature 541 555 - -
Amo09g1157 1260 PRINTS Disease resistance protein signature 783 799 - -
Amo09g1157 1260 PRINTS Disease resistance protein signature 372 387 - -
Amo09g1157 1260 PRINTS Disease resistance protein signature 448 462 - -
Amo09g1157 1260 ProSiteProfiles TIR domain profile. 173 336 IPR000157 GO:0007165
Amo09g1157 1260 Pfam NB-ARC domain 355 572 IPR002182 GO:0043531
Amo09g1157 1260 SMART PB1_new 20 110 IPR000270 GO:0005515
Amo09g1157 1260 Gene3D - 171 332 IPR035897 -
Amo09g1157 1260 Pfam TIR domain 174 341 IPR000157 GO:0007165
Amo09g1157 1260 SUPERFAMILY "Winged helix" DNA-binding domain 578 681 IPR036390 -
Amo09g1157 1260 Gene3D - 333 501 IPR027417 -
Amo09g1157 1260 SUPERFAMILY CAD & PB1 domains 22 114 - -
Amo09g1157 1260 SUPERFAMILY Toll/Interleukin receptor TIR domain 171 313 IPR035897 -
Amo09g1157 1260 Gene3D - 506 590 IPR042197 -
Amo09g1157 1260 SUPERFAMILY L domain-like 693 1033 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1157 Amo-Chr9 30605799 30611538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1157 171 979 WRKY Transcription Factor Family AT4G12020 33.816 1.03e-101 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1157 - - adu:107472645 2184.45