Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1156 ATGAGCAGCCTTAGCAATAAGGAAGTTCTTATTATCCTCGACAATGTGAAGGATTCTGATCAACCATTGTTAGAAGCAGTTTGCCAAGGGTACAAGAGCCACAGTCGAGAAAGTAAACTTATTATAACAACAACACATAAGCATTTGCTTGAAAACAGAGTTGATTGGATATTTGAGGTCAAACAATGGGACGACTCAAAATCTATAGAGCTTCCTAGCCTGAAAGCATTCGAGGAAAGCATCCCTGCAAAGCCTTATGAGATTCTAGTGAATAAGGTTGTTAAGTATGCCGGGGGAATTCCTTTAGCTCTGAACCAAGTTTTTATGCTAAGTTACTTGTTGAGATTCGCATGCCGCACAGCCATGTCAAGAAACTCTGGGAGGAAAAGCAGATTTTCCATTCTGATGACTCAGTACTTTGTGCAATTGGAACAGGAACTTAATAATTTAGAAGGGATCGACTTAAGAGAATGCAAAGAGTTAGAAGAGCTTCCAGATTTGTCTGAGGCTAAAAGACTCAGATGGGTGAGTCTCTCCGGTTGTGAGACTTTGCCTATTCTTCATTCATTTGTTTTTTCCTCCAACACACTTGTTTCTTTGATCTTGGATAGGTGTACAAATTTGCAGTGTGTTAAGGCCGAAAGGCATTTGAATTCTCTGCAGCACGTAAGTGTCAAAGGCTGCTCAAATCTCAGAATTTGTGTATCGTCAGATTTAATTGAAAACTTGGATTTGAGCAACACAAAGGTTGAAAAGCTGGACAAATCAATTGGGAAATTACTAAAGGTTGAATGCCTCATTCTAGAAGGTTCAAGAGTTAAGCATATTCCAAAGGAGCTATCAGCCTTAAAATTGCTTAAGAAGTTGAAGCATTTATACAGTGGACTAGAAATTGACAAGCATCAGCTGCAAGGCCTATTTAACGGCTTATCATCTCTACAAATACTACATTTGAAGGATTGTAGTCACTTGTTTGAATTCCCTGACAACATTGATTCTTTATCGAAATTGCGCAAATTAAGGCTAGATGGAAGCAATGTGACCTGGTTGCCTGCAACCATCAAGTGTCTTCAAGAGCTGGAAATTTTGTCCCTAAATAATTGCAAGTTTCTTGAGACACTGCCAGAGCTTCCATCCTCTATCAAGGAGTTCTCTGCTGATAACTGCATCTCATTGGAGTCTGTATCATCTCTAAACACTCTGGCAACAAAGATGGTGGGAAAGACGAAATGCATCTCCTTCAATAATAGCTTGAAATTGTTGGCTGGACACACATTGCATTCGATCATGGAAAGCATCCATTCAACAATGGTGAGTGCTGTATCTAGCAATGTCACGGTAAGAAGCTATACAATTGATGTCCATAGCTACAATTACAATAGTGTGGAGGTCTGTTTGCCAGGAGACACAATCCCGAAGCAATTTGCATATAAAACGGAGAAATCCTCCTCCATAACAATTGAACTCCCTGAATCTCCTTCCAATTTTCTTGGCTTTATCTATTCAGTTGTTCTTTCACCGCGTCATGGAAGGGAGAAGCACGGTGCCAAAATCCAATGCGAATACAACTTTGCAGGAGGCAAGAATTCTTCGTGGGAGGACATAACTATAAGTGAATTGAACTCATATCATGTATATATATGGTATGATCCATTCCTCACTGACAAAATTCTCGGACAATATGGGCCAAGTTTTCATCTTAAGTTCAGTGTTGCAACTGACACGGGAAATTGA 1734 0.3979 MSSLSNKEVLIILDNVKDSDQPLLEAVCQGYKSHSRESKLIITTTHKHLLENRVDWIFEVKQWDDSKSIELPSLKAFEESIPAKPYEILVNKVVKYAGGIPLALNQVFMLSYLLRFACRTAMSRNSGRKSRFSILMTQYFVQLEQELNNLEGIDLRECKELEELPDLSEAKRLRWVSLSGCETLPILHSFVFSSNTLVSLILDRCTNLQCVKAERHLNSLQHVSVKGCSNLRICVSSDLIENLDLSNTKVEKLDKSIGKLLKVECLILEGSRVKHIPKELSALKLLKKLKHLYSGLEIDKHQLQGLFNGLSSLQILHLKDCSHLFEFPDNIDSLSKLRKLRLDGSNVTWLPATIKCLQELEILSLNNCKFLETLPELPSSIKEFSADNCISLESVSSLNTLATKMVGKTKCISFNNSLKLLAGHTLHSIMESIHSTMVSAVSSNVTVRSYTIDVHSYNYNSVEVCLPGDTIPKQFAYKTEKSSSITIELPESPSNFLGFIYSVVLSPRHGREKHGAKIQCEYNFAGGKNSSWEDITISELNSYHVYIWYDPFLTDKILGQYGPSFHLKFSVATDTGN* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1156 577 PANTHER NB-ARC DOMAIN PROTEIN 4 107 - -
Amo09g1156 577 PRINTS Disease resistance protein signature 3 17 - -
Amo09g1156 577 PRINTS Disease resistance protein signature 97 111 - -
Amo09g1156 577 PRINTS Disease resistance protein signature 308 324 - -
Amo09g1156 577 SUPERFAMILY L domain-like 147 396 - -
Amo09g1156 577 PANTHER NB-ARC DOMAIN PROTEIN 139 479 - -
Amo09g1156 577 Pfam NB-ARC domain 3 107 IPR002182 GO:0043531
Amo09g1156 577 Pfam C-JID domain 466 543 IPR045344 -
Amo09g1156 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 139 479 IPR044974 GO:0006952
Amo09g1156 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 107 IPR044974 GO:0006952
Amo09g1156 577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 108 IPR027417 -
Amo09g1156 577 Gene3D Ribonuclease Inhibitor 237 448 IPR032675 -
Amo09g1156 577 Gene3D Ribonuclease Inhibitor 136 236 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1156 Amo-Chr9 30598193 30599994 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1156 100 363 WRKY Transcription Factor Family AT4G12020 26.692 2.14e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1156 - - adu:107465375 1047.34