Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1155 ATGGAGAATTACGACGTGAAGTTTCTCTGCAGCTATGGTGGCGAGATCCACCACCGCCCCAACGACAAGAAGATCTCCTACGTCGACGGCCACAACAAGCTCCACTACGTTAACCGTGGAATCGACTTCACCGCCATGCTCGCCGAACTCTCCGCCCTCTTTGACGCCGCCGGTGACATCCACTTCAAGTATCAGCTCCCCAGCGATGACTTTGACGCCCTAATATCCGTCACCAGCGACAGCGGCCTAAACAGCCTGATGCTTGAGTATGATAACCTCTACAGAGATTCCCCTAAAACCGCTCGGATGAGATTATTCATCTTCCCTGGTAACGGTCCTGATTCTGCGTCCACCCAACCTTTCCCAGCTAAACTGAAATCCAAAGTCAACAACGGTGTTGTTGTTCCTCCGCAAATTATGCCGGTGAAGTTCCAAGATCTGCCACCGGTTAACAATTTTAATACCTTAGACCGGGTGTTGGATTCGGATCCAAAAGTGAATCGACCGATTGAAGATTCCGATTCTTCCTGTTTGAATAGTTTGCTACCTGATTTACAGTATGATGTTTTCATCAGCTTTAGAGGTGAGGATACACACGCAAGCTTCACTTCCCATCTTTTCAAAGCCCTGTCCCGAAAGCTGATAGTTACATACACTGATGACTTGCTTCACGAAGGAGATTCGATCACGTCCCTCCTCCTCAGAGCAATTGAAGAGTCTTGCCTTTTGCTTGTTGTATTCTCAGAGAACTACGCATCCTCAAAGTGGTGCTTGCAAGAACTGGCTAAAATAATGGAGTGCAAGAAAGAATTTGGACGGCTTGTTATACCTGTCTTCTACAACGTTGATCCATCACATGTAAGGTATCAGCTAGGAAGTTACAGTGAAGCGTTTAAAAAACACTTGCAGAATAACAAGAAGGCGGATGTTCAGAAGAACCCCTTTTTGTTCAATTTTGTTGACGATCGTAAGCTGATTGACCATTACCCACCCAATGATAGTAAAAGTCTCGTTGGCATTAGTGAAAATCTTGAAAAGGTAGAATCACTATTAAGTGAATATGTTGAAGTCAGAATGATTGGAATTTGTGGCATAGGGGGTATAGAAAAAATAACTCTAGCAATACTTATATTTGAGAAATATTCTTATACGTTTGAAGGCTCCTGCTTCTTAAAAAATGTACGGGAAAGATCAGGAAACTATGGACTAACTGAGTTATGTCATCGACTTTATTTGGAGCTCTTACAGGGAAAATTTTGGCAAAATAACACAGGAAAATCCACTTTTGTTGAGGACAGGGTAAGCAAACAAAGAAATTTCATAGTTCTTGATGACGTGATTAGTTTAGAGCAATTAGATTACCTGGTTCAGAAGCTTCAATGGTACAAAAATGTGCTGGTTCCAACGGTTGAAACAATATATGAGATGAAGATATTAGATTCTCATGAATCATTTAAACTGTTTAGTATGAATGCATTCAATGAAGACTATCCACAAATTGGATACGAGGAGCTATCATGGAAAGCGGTTGGCTGTTGCAAAGGCATCCCACTAGCCTTAATAGCATTGGGTTCTTTTCTTCATTCAAAGAGTAAAACTGAATGGCATAGTGCATTGAAAAAGCTTGAGAAGACACCAGCTCCAGAAATTCAGAATATTTTAAGATTGAGTTATGATGGATTAAATGATGAGGCAAAACAAATTTTTCTAGACATCGCATTTTTTTAA 1728 0.4132 MENYDVKFLCSYGGEIHHRPNDKKISYVDGHNKLHYVNRGIDFTAMLAELSALFDAAGDIHFKYQLPSDDFDALISVTSDSGLNSLMLEYDNLYRDSPKTARMRLFIFPGNGPDSASTQPFPAKLKSKVNNGVVVPPQIMPVKFQDLPPVNNFNTLDRVLDSDPKVNRPIEDSDSSCLNSLLPDLQYDVFISFRGEDTHASFTSHLFKALSRKLIVTYTDDLLHEGDSITSLLLRAIEESCLLLVVFSENYASSKWCLQELAKIMECKKEFGRLVIPVFYNVDPSHVRYQLGSYSEAFKKHLQNNKKADVQKNPFLFNFVDDRKLIDHYPPNDSKSLVGISENLEKVESLLSEYVEVRMIGICGIGGIEKITLAILIFEKYSYTFEGSCFLKNVRERSGNYGLTELCHRLYLELLQGKFWQNNTGKSTFVEDRVSKQRNFIVLDDVISLEQLDYLVQKLQWYKNVLVPTVETIYEMKILDSHESFKLFSMNAFNEDYPQIGYEELSWKAVGCCKGIPLALIALGSFLHSKSKTEWHSALKKLEKTPAPEIQNILRLSYDGLNDEAKQIFLDIAFF* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1155 575 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 180 311 - -
Amo09g1155 575 CDD PB1_UP2 9 108 - -
Amo09g1155 575 SUPERFAMILY CAD & PB1 domains 22 117 - -
Amo09g1155 575 Gene3D - 478 562 IPR042197 -
Amo09g1155 575 ProSiteProfiles TIR domain profile. 185 306 IPR000157 GO:0007165
Amo09g1155 575 Pfam PB1 domain 21 109 IPR000270 GO:0005515
Amo09g1155 575 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 180 311 IPR044974 GO:0006952
Amo09g1155 575 SMART till_3 186 326 IPR000157 GO:0007165
Amo09g1155 575 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 324 575 - -
Amo09g1155 575 SUPERFAMILY Toll/Interleukin receptor TIR domain 180 305 IPR035897 -
Amo09g1155 575 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 324 575 IPR044974 GO:0006952
Amo09g1155 575 SMART PB1_new 20 110 IPR000270 GO:0005515
Amo09g1155 575 Gene3D - 319 476 IPR027417 -
Amo09g1155 575 Gene3D - 159 313 IPR035897 -
Amo09g1155 575 Pfam TIR domain 186 312 IPR000157 GO:0007165
Amo09g1155 575 PRINTS Disease resistance protein signature 433 447 - -
Amo09g1155 575 PRINTS Disease resistance protein signature 513 527 - -
Amo09g1155 575 PRINTS Disease resistance protein signature 359 374 - -
Amo09g1155 575 Pfam NB-ARC domain 342 559 IPR002182 GO:0043531
Amo09g1155 575 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 324 572 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1155 Amo-Chr9 30594607 30596560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1155 338 575 WRKY Transcription Factor Family AT5G45050 30.888 2.75e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1155 - - adu:107464414 966.066