Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1153 ATGTTATGTCTTGACCCCCCCCTCTTCTTTCCTCTTCCTTCATATTGTAGGGACGAAATTGAATTCATTCAGAATATTGTCAAAGATGTTTTGCAGAAGCTGATTGACCATTACCCACCCAATGATAGTAAAAGTCTCGTTGGCATTAGTGAAAATCTTGAAAAGGTAGAATCACTATTAAGTGAATATGTTGAAGTCAGAATGATTGGAATTTATGGCATAGGGGGTATAGAAAAAACAACTATAGCAAGACTTATATTTGAGAAATATTCTTATACGTTTGAAGGCTCCTGCTTCTTAGAAAATGTACGGGAAAGATCAGGAAATTATGGACTAGCTGAGTTACGTCGTCGACTTTATTTGGAGCTCTTACAGGGAAAATTTTGGCAAAATAACACAGGAAAATCCACTTTTGTTGAGGACAGGGTAAGAAAACAAAGAAATTTCATAGTTCTTGATGACGTGAGTAGTTTAGAGCAATTAGATTACCTGGTTCAGAAGCTTCAATGGTGTGGCGCAGGTAGTAAGATCATTATCACAGCTAGAGACAAAAATGTGCTGGTTCCAACGGTTGAAACAATATATGAGATGAAGATATTAGATTCTCATGAATCATTTAAACTGTTTAGTTTGAATGCATTCAATGAAGACTATCCACAAATTGGATACGAGGAGCTATCATGGAAAGCGGTTGGCTGTTGCAAAGGCATCCTACTAGCCTTAATAGCATTGGGTTCTTTTCTTCATTCAAAAAGTAAAACTGAATGGCATAGTGCATTGCAAAAGCTTGAGAAAACATCAGATCCAGAAATTCAGAATATTTTAAGATTAAGTTATGATGGATTAGATGATGAGGCAAAACAAATTTTTCTAGACATCACATTTTTTTTAAGGGAGAGCTTTTGTGGCTTGTATGCAGCTATTGGCATGAGATCCTTTCTTGATAGAGCTTTAATAGCTATATCTCATAATTGTGTGCGGATGCATGACTTGATCCAAGAATTAGGTTGGGATATCGTTTGTCAACAATCTAGTGGAAATCCTGAAAATCGTAGCCACTTGTGGGATTCTAATGATATTCGGGATGTTTTGGGAAACAACAAAGGAACTGATTCTATTGAAAGCATAGTGTTTGATATGTCTCAAATAGCAGATCTACAGTTGAATGCTGATACATTCAAAAAGATGCCTAAGTTAAGATTTCTCAAATTATATATCCCATCAAAAAGTGATGGCAGATTAAATAAACTGCAGCTTCCCGTAGGACTAAAGCCATTTCCTTCTAAATTAAGATACTTGGAGTGGGATGCCTACCCTTTGCCATCTCTGCCATTGAATTTTTGTCCTGAGAAGCTTGTTACTCTTCGCATCCGGAATAGTAAACTTAAAAGACTTTGGGATGGGGTTCAGAATCTTGTTAATTTAGAGGAAGTAGATCTAACAGATTCCCAAAAGTTGGTGGAGCTTCCGGATTTCTCCAAGACAGATAATCTCAAAAGTGTACATCTGTCTGGCTGTCGAAGTTTGCGTCATGTCCATCCATCTCTTTTATCACTTGGAAAACTTGAACTTTTAAATCTTCTGAACTGTGCAAAACTTGAGATGCTTGAAACTAAGATGCATTCAAAATCTCTTAAGCACCTCTATATCAAGAGCCGCACAAGTTTATCCTATGTCAGTCACTTTTCATCTTTACGAAAATTACTTCTAGATGGAAGCCCTGTGGAGACATTGCCGGTGAGCATCAAGCACCTTACGGAGCTGAAAACACTGTCTCTAAAAGGGTGTAAGATGCTTTAA 1800 0.3711 MLCLDPPLFFPLPSYCRDEIEFIQNIVKDVLQKLIDHYPPNDSKSLVGISENLEKVESLLSEYVEVRMIGIYGIGGIEKTTIARLIFEKYSYTFEGSCFLENVRERSGNYGLAELRRRLYLELLQGKFWQNNTGKSTFVEDRVRKQRNFIVLDDVSSLEQLDYLVQKLQWCGAGSKIIITARDKNVLVPTVETIYEMKILDSHESFKLFSLNAFNEDYPQIGYEELSWKAVGCCKGILLALIALGSFLHSKSKTEWHSALQKLEKTSDPEIQNILRLSYDGLDDEAKQIFLDITFFLRESFCGLYAAIGMRSFLDRALIAISHNCVRMHDLIQELGWDIVCQQSSGNPENRSHLWDSNDIRDVLGNNKGTDSIESIVFDMSQIADLQLNADTFKKMPKLRFLKLYIPSKSDGRLNKLQLPVGLKPFPSKLRYLEWDAYPLPSLPLNFCPEKLVTLRIRNSKLKRLWDGVQNLVNLEEVDLTDSQKLVELPDFSKTDNLKSVHLSGCRSLRHVHPSLLSLGKLELLNLLNCAKLEMLETKMHSKSLKHLYIKSRTSLSYVSHFSSLRKLLLDGSPVETLPVSIKHLTELKTLSLKGCKML* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1153 599 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 599 - -
Amo09g1153 599 Pfam Leucine Rich Repeat 451 470 IPR011713 -
Amo09g1153 599 Gene3D - 23 194 IPR027417 -
Amo09g1153 599 PRINTS Disease resistance protein signature 142 156 - -
Amo09g1153 599 PRINTS Disease resistance protein signature 68 83 - -
Amo09g1153 599 PRINTS Disease resistance protein signature 234 248 - -
Amo09g1153 599 PRINTS Disease resistance protein signature 583 599 - -
Amo09g1153 599 Gene3D - 199 283 IPR042197 -
Amo09g1153 599 SUPERFAMILY L domain-like 327 597 - -
Amo09g1153 599 Gene3D Ribonuclease Inhibitor 542 599 IPR032675 -
Amo09g1153 599 Gene3D Ribonuclease Inhibitor 349 541 IPR032675 -
Amo09g1153 599 Pfam NB-ARC domain 51 275 IPR002182 GO:0043531
Amo09g1153 599 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 599 IPR044974 GO:0006952
Amo09g1153 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 293 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1153 Amo-Chr9 30588541 30590609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1153 12 599 WRKY Transcription Factor Family AT4G12020 33.984 1.84e-80 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1153 - - adu:107464414 1013.83