Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1152 ATGAGAAGCTTCCAGGTAACTTCATTGCTGATAGGATTAAAGAAGTTACAGAATAATAGCATGAAGAAAGTTCAGAAATGGAGGGAAGCTCTCACTGAAGCAGCAAATTTAGCTGGGTGGGTCTCCAGCTCCTGTAGGGATGAGTCTGAGCTCATTCAAAAGATTGTGAAAGACGTTTTGCAGAAGCTGATTGATCACAACCCACCGAATGATATTAAAAGTTTTGTAGGTATTGACGGAAATCTTAAAGCTATAGATTCGTCGCTAAGAGAAGTCCTTGAAGTCCAAACAAGAATGATTGGGATTTGGGACATGGGTGGGATAGGAAAGACCACTCTAGCAAAACTTGTATTCGAGAAATACTCTTATCAGTATGAAGGGTCCTGCTTCTTGGAAAATGTTAGAGAAAGATCCGAAAAATATGGACATGCGCTACATGAATTACGCAATGAACTTTACTCAGAGTTGTTGCAGGAAAATAATTGCAAAGACAGCACAAGAATATCCACCAATGCTAAGGAAAGGCTCCGCAGTCAAAGAAATTTCATAGTTCTTGATGACGTGAGTTGTTCAAAGCAATTAAAATACCTTGTTGGGGAGCATCAATGTTATGGTCCAGGTAGTAAGATCATTGTCACAGCTACAGACAAGAGTGTATTTGCTCAATGGGAAGATGAAGAAATATATGAGATGAAGGTGTTAAATTCTAAAGACTCCCTTACATTGTTTAGCTTGAATGCATTCAATCAAGACCATCCGAAAATGGGATATGAAAAGCTATCATGGGAAGCAGTTAAATATTGTGAAGGTTTACCATTAGCTTTAAAAGTATTGGGTTCTTTTCTTCGTTCCAAGAGTGAAACTGAATGGGATAGTGCATTGCAAAACATCAAGAAGATTCCTGATGCACCAATTCAAAATGTATTAAGGTTGACTTATGATGCATTAAATTATGAGGAGAGAGAAATTTTTCTAGACATTGCATRTTTTTTTAAGGGATTCCTTAAAGAACACGTAGTTAGTCTGTTAGAAAGTTGTGGCTTCGATGCAGCTAATGGCATGAGGTCCCTTCATGAAAAGTCTCTAATAGCTATATCTGATAATTCTCTGAGGATGCATGACTTGATCCATGAAATGGCTTTGGAAATTGTTCGCAAAGAATCTATCAAAAATCCTGAATATCGTAGCCGTTTGTGGGACTATAATGATATYAGGGATGTTTTGGGAAACAACAAGGGAACCGATGCAATTGAAAGCATAATGTTAGATATGTCTCATATAGATGATCTACAGTTGAGTGTTGACACATTCAAAAAGATGTCTAGATTAAGATTGCTCAAATTGTATGACTCGTCAGAGAAGAATGGTAAATTAAGTAATCTGCAGCTTCCTATAGGGTTGAAGCCATTAAGGTACTTTGAATGGCATGCGTACCCTTTGCCGACTCTGCCGTCAAACTTTTGTCCCGAGAAGCTTGTTACCCTCCGTATTCAGAACAGTCAACTTAAAAGACTATGGGATGGAAAGCAGAATCTTGTGGATTTAGAGGAAGTAGATCTAACTGGGTGCCAAAAGTTGGTAGAACTCCCAGATCTCTCTAAAGCAAAAAATCTTAAAAGTGTACATCTGTCCAACTGTAGAAGTTTGGCCCATGTCCATCCATCTATTTTATCACTTGGCAAGCTTGAGCTTTTGGATCTATTGAATTGCATTAAACTTGAAATGCTTGGAAACAAGAAGCATTCAAGATCTCTTAAGCACCTGTGCGTTTGTGGCTGCTCAAATTTGATAGAATTTGCTCTATCTTCAGAAGAAATAGAATACTTGGATTTAAGCCACACTGGCATCAAAGTATTGCACCCATCCATTGGGCGTTTCACCAAAGTGAAAGAGATATCTCTTTGTGGGATAAGACTTAAGAATCTTCCAGACGGGTGGTCTCGCTTGAAATCTCTTGAGAAACTTTCGCTCTTTAAATGTGGAAGGGTGGTTTCCAAGCAGAAATTACATGATATATTTGATGGCTTGCAATCATTGCAAAACCTGTCTCTGGTGAACTGTGATAGTCTATTTGAACTCCCTGGAAATGTCGGCCGCTTATCATCGTTACAAAAGTTACAGTTGGATGGAAGCCATGTGGAGACTTTGCCTGGGAGCATCAAGCATCTTCCAAATCTGAAAACACTCTCATTAATAGGTTGTAAGATGCTTCAATATTGGCCAGAGCTTCCTCCATCCATTCGACATTTGAAGGCCCTAAACTGCACATTGCTGCAAAAAGTAGCATTTGGTTTATTTAGTTATGAGCTACAAGAAGAAAAACGCGTAAGTATTTCGTTGCAGAATTGTGTGAATTTGGATGTGGAGAACTGTATTTATTCATTCCTTCAACATGTAAGAAAACAGGCATATGAATGTGAATTTAGGAGGAGAGGAGTAGGAAGAGAAAACATTGTAGTTTGGAGAAGTGACTTCTTTAAAATTTGTTACCCGGACTCCAGAGTACCAGAGTGGTTCACATATCGGGCAGTGGGGTCTTCTATTACTTTTGAAGTTGCTCCTCCTTCCAGTTACTATTTTGGTTCRCTTCTCTGCATTGTTCTCTCTTCGCACAGTTTGGATTTCGAGCTTGATATTAAATGCAGATGCTACTTGGAAGATGGAAAAATGCACAAGTATTCGCTTGGCATATTATTTTTAAGTCACGTTCCAGTGGAAGGGCATTCAGATCATGTTTATATGACGTATAACTTCAACGGAATCTTCGATGTGATCAAGCTGGACCAATTGAATAATAAGATTGCCTCCTCCGGACATAAACCAAAACTCACCTTTGAATTCTTTGTTAGCAGTGGCATGGCTCAGGGAAAAAAAGATTTAAATTTGTTGATCAAAGAGTGTGGTGTCTATCCGTTAAATGACTCCAATAATTGCGTGGAATAG 2943 0.3863 MRSFQVTSLLIGLKKLQNNSMKKVQKWREALTEAANLAGWVSSSCRDESELIQKIVKDVLQKLIDHNPPNDIKSFVGIDGNLKAIDSSLREVLEVQTRMIGIWDMGGIGKTTLAKLVFEKYSYQYEGSCFLENVRERSEKYGHALHELRNELYSELLQENNCKDSTRISTNAKERLRSQRNFIVLDDVSCSKQLKYLVGEHQCYGPGSKIIVTATDKSVFAQWEDEEIYEMKVLNSKDSLTLFSLNAFNQDHPKMGYEKLSWEAVKYCEGLPLALKVLGSFLRSKSETEWDSALQNIKKIPDAPIQNVLRLTYDALNYEEREIFLDIAXFFKGFLKEHVVSLLESCGFDAANGMRSLHEKSLIAISDNSLRMHDLIHEMALEIVRKESIKNPEYRSRLWDYNDIRDVLGNNKGTDAIESIMLDMSHIDDLQLSVDTFKKMSRLRLLKLYDSSEKNGKLSNLQLPIGLKPLRYFEWHAYPLPTLPSNFCPEKLVTLRIQNSQLKRLWDGKQNLVDLEEVDLTGCQKLVELPDLSKAKNLKSVHLSNCRSLAHVHPSILSLGKLELLDLLNCIKLEMLGNKKHSRSLKHLCVCGCSNLIEFALSSEEIEYLDLSHTGIKVLHPSIGRFTKVKEISLCGIRLKNLPDGWSRLKSLEKLSLFKCGRVVSKQKLHDIFDGLQSLQNLSLVNCDSLFELPGNVGRLSSLQKLQLDGSHVETLPGSIKHLPNLKTLSLIGCKMLQYWPELPPSIRHLKALNCTLLQKVAFGLFSYELQEEKRVSISLQNCVNLDVENCIYSFLQHVRKQAYECEFRRRGVGRENIVVWRSDFFKICYPDSRVPEWFTYRAVGSSITFEVAPPSSYYFGSLLCIVLSSHSLDFELDIKCRCYLEDGKMHKYSLGILFLSHVPVEGHSDHVYMTYNFNGIFDVIKLDQLNNKIASSGHKPKLTFEFFVSSGMAQGKKDLNLLIKECGVYPLNDSNNCVE* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1152 980 Gene3D Ribonuclease Inhibitor 407 583 IPR032675 -
Amo09g1152 980 Gene3D Ribonuclease Inhibitor 604 807 IPR032675 -
Amo09g1152 980 Pfam C-JID domain 831 969 IPR045344 -
Amo09g1152 980 Pfam TIR domain 13 68 IPR000157 GO:0007165
Amo09g1152 980 Pfam NB-ARC domain 82 299 IPR002182 GO:0043531
Amo09g1152 980 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 327 IPR027417 -
Amo09g1152 980 Gene3D - 5 59 IPR035897 -
Amo09g1152 980 PRINTS Disease resistance protein signature 99 114 - -
Amo09g1152 980 PRINTS Disease resistance protein signature 175 189 - -
Amo09g1152 980 PRINTS Disease resistance protein signature 721 737 - -
Amo09g1152 980 PRINTS Disease resistance protein signature 268 282 - -
Amo09g1152 980 Coils Coil 131 151 - -
Amo09g1152 980 SUPERFAMILY L domain-like 371 786 - -
Amo09g1152 980 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 906 IPR044974 GO:0006952
Amo09g1152 980 Gene3D - 233 317 IPR042197 -
Amo09g1152 980 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 32 906 - -
Amo09g1152 980 Gene3D - 60 228 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1152 Amo-Chr9 30563842 30567444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1152 25 706 WRKY Transcription Factor Family AT4G12020 35.429 1.25e-91 319