Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1105 ATGGACGCCTTAGACATGAAATCAAGGGAGATATTCTTCTCAGAAATTGATTCCTTCCTCGATTTCAATTACTCCAACTCCTTCCAAAACAACAGCGCCAAAAACGACATTGTCATTCCAATTCAATCCAAATTTGGTCCCATGATGAATCACCATGCCAAATGTAGTTGCTTGGATATCGAGTTTTGTATATCAAAGCTTTCCTCCTTTAATTATGCATCACAGTCTATTAGCCAAAGCATATATCGTATTCATTCGGCCGGAACTGTTCCGATTCGAGCAGAATGGGATCGGTAA 297 0.3973 MDALDMKSREIFFSEIDSFLDFNYSNSFQNNSAKNDIVIPIQSKFGPMMNHHAKCSCLDIEFCISKLSSFNYASQSISQSIYRIHSAGTVPIRAEWDR* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1105 98 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 5 83 IPR045281 GO:0009909
Amo09g1105 98 PANTHER BNAC09G32640D PROTEIN 5 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1105 Amo-Chr9 27401410 27401854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1105 8 72 C2C2-CO-like Transcription Factor Family AT5G57660 41.429 1.84e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1105 - - gmx:100792197 102.834