Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1097 ATGTGTATTAGAAAACCCCCATTCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCTCAGCAAGTTCTCCGTCATGTCAATGTCTCTCTCCATGACGGAAGTGCGCTCGTCCTAACTGGTGCAAATGGCTCTGGCAAGACCACCTTCCTCCGCATGCTAGCTGGATTTTCCCGTCCCTCAGCTGGTGAAATTCTTTGGAATGGACACAACATACAAGATTCTGGAATCTTCCACCAGTACAAGCTCCAGCTCAACTGGCTCTCCCTCAAGGATGCGATCACTGATCGGTTCACGGTTCTCGAAAATGTTCAGTGGTTTGAGGTTCTTGAAGGAAAGTCTGGCAGGGCTTTACCTGCGCTTGAGTTGATGGGGCTGGGCAGATTGGCCAAGGAGAAGCCAAGGATGCTATCCATGGGGCAGCGGAAAAGAGTGCAACTTGCAAGGTTGATTGCTCTTGATCGACCCATATGGTTGCTTGATGAGCCTTCCGTTGCGTTGGATGATGAAGGGGTGAAGTTACTTGAGTACATCATTTCGGAACATCGGAAAAATGGAGGGATTGTGATTGTGGCTACTCATTTACCTATTGAAATACATGATTCCATGGTGTTGCGGCTCCCACCCAGGTTTCCAAGGAGGATGACTTTCTTTGATATGCTTGATCGTTCGGATATTATGTAA 690 0.4783 MCIRKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGSALVLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHNIQDSGIFHQYKLQLNWLSLKDAITDRFTVLENVQWFEVLEGKSGRALPALELMGLGRLAKEKPRMLSMGQRKRVQLARLIALDRPIWLLDEPSVALDDEGVKLLEYIISEHRKNGGIVIVATHLPIEIHDSMVLRLPPRFPRRMTFFDMLDRSDIM* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1097 229 SMART AAA_5 35 223 IPR003593 -
Amo09g1097 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Amo09g1097 229 Gene3D - 8 208 IPR027417 -
Amo09g1097 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 201 IPR027417 -
Amo09g1097 229 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 208 IPR005895 GO:0017004|GO:0022857
Amo09g1097 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 229 IPR003439 GO:0005524
Amo09g1097 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 9 223 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1097 Amo-Chr9 27116567 27119060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1097 24 207 Calmodulin-binding Proteins AT2G36910 25.000 2.42e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1097 - - lja:Lj0g3v0105229.1 405.601