Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1061 ATGGGGGGCTCTGAGGCTCTTAGCATGTTGTTCTTCATCATCACCACCTTCTTGATGATGATTCTGCTATCATCATTGCAGCAAAGTACCCACATTATTTTTACTGTGGATTCTTTGTGGAATAGTTATGATGTTCATGACATGTATTTCATTGACGAGAGCAGCATTCAACAAGGGAACAACATCAATGATGGAAACAGCAAGAAGAATGTTGAGAAAATCTCAGGTTTGGATGAGAATGAAGAGAAGCAAGCCATGTTTGTTGAAACATTCAGAACATTGCTTGGACTCAAAAGCTTCCACGAAAAAGTACCTTCTTCATCTTCTTCTTCTGAGTTATTATTCTCATTCTCATTCTCTCCTTCACCTTCTCCATCACCAACAAGCATTGAACCTGAGGCTGTAGCTCCATTATCTCCAGCACCTTCTCCTGTGGTTCACAACCATCCTCACCATCATCATCATCATCATCATCATTATTATCATTCTCATTGGAATCTGAAGAAAGAAGCTCATCATCATCATGAAGAAGATAGAGGCAGAGCTAAGAAAATACTAGTAGCAATTCTTGTTTCTGTGGGAATTGCTACATTAATTTGTGGTTGTGCCTTAATCTTCTTCTGCAGGAAATTCAGGAACCAAAGGAAGAAACCAAAAAGGACCATGCCACTCTGTAGCAGCAAGAAAAAGAACAAAAACAAGGTGAGTTTAAACTCAAGGCTAGATCTGTTTTATCTTGATTCCTTAGGTGAAGATTTAGAACAACAACAACAAGAAGAAGCAGAAGCTTGCACCTTGAAAGAAATTAGTTATCAGAATAATCCTACTGAAGAATGTGACAATGTTAGTAGTTCTTCCACAAAGGAGATTCTACCTGTTCATGACGAAGAGGAAGAAGATATTGAATCTGAATCTGAATCTGGTGGAAGAGAAATTGGAATCTCTGCTGACCCTGAAGAAGAAGAAGAAGAAGAAGAGAATCATTCGTCAGAGAATGAAAGTTTTCATTCCATTATTAATTCACAAACAAATTCAAGACTCTCTAATGCTTCATCTTCTAGCCTTGTTAGTGAAACATTGATGTCACCAAAGGATTCATCACCATTACCAAACCAATTTCTTAGTTCACCAAATAACTCAATTTCAAACCCTAAACCACCGCCACTTACTCCAAAACATGAAAATCAAGAAACTGATGAGACTATTAACCAATTTGTCAAACCCTCTACATCTCCACCGCCTCCCCCGCCACCGCCGCCGCCACCAACTCCGCCTCTTCAAATGCCACTCTTCAGATTACATTCTCTCACTTCTTCATCCAGAGCTTCCTCTCCCTCTCCGCTTTCTTTAAAATCTCATAACTTCTCATCACCATCTCCAAGAAACTCAGACTCAAATCAAAGTCCTCAAACAGAGTTGCCTTCTCCGCCGCCGCCGCAACCGGCGAAATCTCCACGCAACAACAACATTCCACCACCGCCATGTCCACCACCGCCATTTCCAAAGAGCAATGTCAAAACACCTCCTCCTCCACCATCTCAACTACCTCAATTCACGGCACTAGGCAAAGATGGAGCACCGCTTCCAAAACTGAAACCGCTTCACTGGGACAAAGTAAGAGCCGCACCAAATCGCACTATGGTTTGGGATAAACTAAGATCAAGCTCCTTTGAGTTGGATGAGGAAATGATTGAGTCACTTTTTGGATACAATTTACAGAGTTCTATCAAGAATGAGGAAACAAAGAGCAAAAGCCCTTCTCCAAGCAAGCATGTTCTTGAGCCTAAACGGCTTCAGAACATTACGATACTATCAAAAGCTATAAATGCAACAGCTGAGAATGTATGTGAAGCCTTAATACAAGGTAAGGGCCTTTCTTTGCAACAACTAGAGGCATTGGTGAAAATGGTGCCCACAAAGGAAGAGGAGGCCAAGCTTGCCAACTATAAAGGCGACATCAATGAATTGGGGTCCGCAGAGAGGTTTGTGAGGACAATGCTTCAAGTCCCATTTGCCTTTCAAAGGGTAGAAGGCATGCTTTACAAAGAGACTTTTGAAGACGAAGTTGTTCACCTAAGGAACTCTTTTTCAATGCTAGAGGAGGCATGCAAGGAACTAAGATCAAGCAGGTTGTTCTCGAAGTTACTAGAAACCGTGCTGAAGACAGGGAACCGCATGAATGTGGGGACGATCCGCGGCGGGGCAAGAGCATTCAAGCTCGACGCCCTTCTCAAGCTAGCAGACGTCAAAGGCATTGATGGCAAAACCACGCTGCTCCACTTTGTGGTTCAAGAAATCATCCGATCCGAAGGGATTCGAGTTTCAGACAGCATCATGGGAAAAATAAGCCAAAAGAACAACAAAAACAGGACCGAAGAACAAAAGGAAGAGGACTACCGAAGAATGGGACTTGAATTAGTCTCTGGCCTAAGCACGGAGCTCTACAATGTGAAGAAAACCGCTACCATCGACTTAGATGTTCTTGCAAGCTCTGTGTCAAATCTATCTGAAGAAATGGCAAAGCTAAAACAACTCGTGGGGAAGGATTTGCATAATGATGGAGAGAGCAGTGAGGGGTTTGTTAACACTATGATGTGCTTCTTGAGTTATGCTGAGAAGAAGCTGAAGGAGTTGGAAGGAGATGAGAACAGAGTGTTGTCACGTGTGAAGGAGATAACTGAGTATTTTCATGGTGATGTCAGCAATAAAGAAGATCAAAACCCACTTAGGATCTTTGTTATAGTGAGGGATTTCTTGGGGATGTTGGATAGCGTGTGTAAAGAGCTTAGAAGGAATAAATCTACTCGTAGCCCAAACCCTCTTGCACCATTTAGATAG 2838 0.4225 MGGSEALSMLFFIITTFLMMILLSSLQQSTHIIFTVDSLWNSYDVHDMYFIDESSIQQGNNINDGNSKKNVEKISGLDENEEKQAMFVETFRTLLGLKSFHEKVPSSSSSSELLFSFSFSPSPSPSPTSIEPEAVAPLSPAPSPVVHNHPHHHHHHHHHYYHSHWNLKKEAHHHHEEDRGRAKKILVAILVSVGIATLICGCALIFFCRKFRNQRKKPKRTMPLCSSKKKNKNKVSLNSRLDLFYLDSLGEDLEQQQQEEAEACTLKEISYQNNPTEECDNVSSSSTKEILPVHDEEEEDIESESESGGREIGISADPEEEEEEEENHSSENESFHSIINSQTNSRLSNASSSSLVSETLMSPKDSSPLPNQFLSSPNNSISNPKPPPLTPKHENQETDETINQFVKPSTSPPPPPPPPPPPTPPLQMPLFRLHSLTSSSRASSPSPLSLKSHNFSSPSPRNSDSNQSPQTELPSPPPPQPAKSPRNNNIPPPPCPPPPFPKSNVKTPPPPPSQLPQFTALGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQSSIKNEETKSKSPSPSKHVLEPKRLQNITILSKAINATAENVCEALIQGKGLSLQQLEALVKMVPTKEEEAKLANYKGDINELGSAERFVRTMLQVPFAFQRVEGMLYKETFEDEVVHLRNSFSMLEEACKELRSSRLFSKLLETVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGIDGKTTLLHFVVQEIIRSEGIRVSDSIMGKISQKNNKNRTEEQKEEDYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSEEMAKLKQLVGKDLHNDGESSEGFVNTMMCFLSYAEKKLKELEGDENRVLSRVKEITEYFHGDVSNKEDQNPLRIFVIVRDFLGMLDSVCKELRRNKSTRSPNPLAPFR* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1061 945 Coils Coil 825 845 - -
Amo09g1061 945 PANTHER FORMIN-RELATED 62 418 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo09g1061 945 PANTHER FORMIN-RELATED 404 945 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo09g1061 945 Pfam Formin Homology 2 Domain 525 922 IPR015425 -
Amo09g1061 945 PANTHER FORMIN-LIKE PROTEIN 62 418 - -
Amo09g1061 945 MobiDBLite consensus disorder prediction 126 163 - -
Amo09g1061 945 MobiDBLite consensus disorder prediction 275 531 - -
Amo09g1061 945 MobiDBLite consensus disorder prediction 275 289 - -
Amo09g1061 945 SUPERFAMILY Formin homology 2 domain (FH2 domain) 534 933 - -
Amo09g1061 945 MobiDBLite consensus disorder prediction 147 163 - -
Amo09g1061 945 MobiDBLite consensus disorder prediction 408 428 - -
Amo09g1061 945 MobiDBLite consensus disorder prediction 333 380 - -
Amo09g1061 945 MobiDBLite consensus disorder prediction 471 516 - -
Amo09g1061 945 MobiDBLite consensus disorder prediction 432 470 - -
Amo09g1061 945 Gene3D Formin, FH2 domain 544 939 IPR042201 -
Amo09g1061 945 ProSiteProfiles Formin homology-2 (FH2) domain profile. 521 945 IPR015425 -
Amo09g1061 945 PANTHER FORMIN-LIKE PROTEIN 404 945 - -
Amo09g1061 945 SMART it6_source 521 937 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1061 Amo-Chr9 24988927 24996832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1061 506 945 FH2 protein (formin) Gene Family AT3G05470 73.982 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1061 - - aip:107618869 1531.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0989 11 28700155 28704510 Amo09g1061 09 24988927 24996832 PCT