Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1056 ATGAAGATTCCCGCCAACGCCATCGCCACCGTCATCTCCGTCTTGTTTGTCTTCTCCATAATAGCGCCATCCTCGTATGCCCTTGGCTCAGGCACCACCCTCGCTGTAACTGACGCCTCCTCCGCCACCGTCTGCGGCATTGTTGCGGCGTCACAGACCCGCCGAATCCAGTGCTACCGCCGGGGAAGTGGCGGAGCAATTATCCCCGTCTTCCCCGACGTTTCATTCTCTTCAATCTCCGGCGGCCGGAGCTACTTCTGCGCCCTCCGCTCCGGCAACTACAGCCTCCTCTGCTGGAACACCACCACCACCACCAACGCCACCACCTTCGAAAGCAAGCGACTTTACAACAATGACACTGTTCTATTCGAGAATCTCGCCGTCGGGGACTCCCAGGTTTGCGCCACGGTTGTGGGAACCGGGACGGCGACGTGTTGGAGAACTGGTAGAAGGAAAGGTTCCGACTTTTCATCTGGGTCGGACCGGTTCGCGTCCATATCATCAGGGTCGGGTTTTTCATGTGGTATTTTGAAGGAAAGTTCTCGAATTCGGTGTTGGGGAAGTAACGCTTCCGTTGCGGATTCCATAGAGAGTGAGTTTCGAAAKGTTTCAATGTTGAGRATTGTGGCTGGCGGTTCACACTTGTGTGGTTTGAATTCAACTGGGTTTTTGGTGTGTAAAGGAAGTAACAGTTTTGGGCAAATTGAGGTTCCTCATCAAGGTGTTGCTTTTGAGTATTCTGYTTTGGCTCTCGGTGATTCTCATAGTTGTGCTATTAWAAGATCCAATGGTTCTGTTTTTTGTTGGGGTGYCAACGGAATTTTCAATGKTAATTTCACAAAAGGTGTGTCTTTTGAGGTTATTGTTTCTGGGTCTGATTTTATCTGTGGATTAACGACAAGAAATTTCTCTGTTTTGTGTTGGGGTCCTGGTTGGTCAAATGGTTCTGATTCTGATTCTGATGTTGTGGTTCCTTTTTTGTCTCCGATTCTTCCGGGTCCTTGTGTTCAATCTTCTTGCAGTGAGTGTGGTATCTATCCTCAATCTCAATACTTGTGTTCTGGTTTTGGTAACATTTGTAAGCCTAAGCCTTGTGGGGCTCAAGTGCCGGTGATGCCGGCTAGGCCTCCTGCGGTGGTGCCATTGCCGGCGGCGGCGCCATCTTCTCGGTCAAAGACCTTGACAACTGGGTTGTTGGCATTTGCCATAGTTGGATCAGTGGGTGCTATTGCTGGAGTTTGCACTCTGCTTTATTGCTTGTGGAATGGTGTTTGTTTAGGGAAGAAGAAAATTCATAATTCTGTTCAACCAACCATTACTAGAGGTGGCAGTTCCAATAATGGTAGGGCCGTTCAATCCAATAGCCCGCTGTCGAGATCAATGACCGTTAGGCGGCAGGGATCGAGGATAATGCGGCGGCAGAGAAGTGGAACCTCGTCGGCTAAACATCCAGACAAGCCTGAGGAGTTCACCCTGGCTGATCTTAGTGCTGCCACCAATAACTTTTCACCCGAAAACAAGATTGGGGCTGGAAGCTTTGGCATTGTGTACCGAGGAAAACTCGCTGATGGACGCGAGGTGGCGATCAAGAGAGGGGAAACAGAATCAGAAACAGGTAACAAGATGAAGAAGTTTCAAGAGAAAGAGAGCGCGTTCGAGTCGGAATTAGCCTCTTTGTCACGACTACACCACAAGCATTTGGTTAGGTTAGTAGGATTCTGTGAAGAAAAAGATGAAAAGCTCTTAGTTTATGAGTACATGAAGAATGGAGCATTGTATGATCATTTGCATGGCAAGAACAATGTGGATAAGAATAGTAGTGTCTTGAATTCTTGGAGAATGAGGATCAAAATCGCATTGGACGCTTCGCGAGGGATTGAGTATCTCCATAATTATGCAGTTCCATCGATAATTCACCGAGATATCAAGTCTTCCAATATCCTTATTGATGCCACTTGGACAGCAAGAGTATCCGATTTCGGATTGTCATTGATGAGTCCGGAACCTGATACTGATTTCCGGCCAACAAAGGCAGCCGGAACAGTCGGATACATCGATCCTGAGTCCTATGGTCTAAATGTATTGACAACAAAGAGTGATGTCTATGGTCTTGGAGTGGTGTTGCTAGAACTCTTAACCAGAAAGCGAGCCATATTCAAAATCGACGAAACTTCAGGCACCCCGGTGAGCTTAGTGGACTTTGCCGTGCCTGCGATCAAGGTCGGGGAATTGGCGAAAATTTTGGACCCAAGGGTTGCGCCGCCTGAGTTGAATGAAATGGAAGCTCTGGAGCTTGTGGCCTATACTGCCATGCATTGTGTGAATTTGGAGGGAAAGGATAGACCAACAATGGCTGACATTGTGGCAAATTTGGAGCGCGCTTTATCCCTTTGTGAAAGTAGTAGCCATGGCAGCATTTCCAGTGGTACAATCTCTGTTGTATCAGACTAA 2451 0.4786 MKIPANAIATVISVLFVFSIIAPSSYALGSGTTLAVTDASSATVCGIVAASQTRRIQCYRRGSGGAIIPVFPDVSFSSISGGRSYFCALRSGNYSLLCWNTTTTTNATTFESKRLYNNDTVLFENLAVGDSQVCATVVGTGTATCWRTGRRKGSDFSSGSDRFASISSGSGFSCGILKESSRIRCWGSNASVADSIESEFRXVSMLRIVAGGSHLCGLNSTGFLVCKGSNSFGQIEVPHQGVAFEYSXLALGDSHSCAIXRSNGSVFCWGXNGIFNXNFTKGVSFEVIVSGSDFICGLTTRNFSVLCWGPGWSNGSDSDSDVVVPFLSPILPGPCVQSSCSECGIYPQSQYLCSGFGNICKPKPCGAQVPVMPARPPAVVPLPAAAPSSRSKTLTTGLLAFAIVGSVGAIAGVCTLLYCLWNGVCLGKKKIHNSVQPTITRGGSSNNGRAVQSNSPLSRSMTVRRQGSRIMRRQRSGTSSAKHPDKPEEFTLADLSAATNNFSPENKIGAGSFGIVYRGKLADGREVAIKRGETESETGNKMKKFQEKESAFESELASLSRLHHKHLVRLVGFCEEKDEKLLVYEYMKNGALYDHLHGKNNVDKNSSVLNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPEPDTDFRPTKAAGTVGYIDPESYGLNVLTTKSDVYGLGVVLLELLTRKRAIFKIDETSGTPVSLVDFAVPAIKVGELAKILDPRVAPPELNEMEALELVAYTAMHCVNLEGKDRPTMADIVANLERALSLCESSSHGSISSGTISVVSD* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1056 816 MobiDBLite consensus disorder prediction 436 490 - -
Amo09g1056 816 Gene3D - 19 202 IPR009091 -
Amo09g1056 816 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 8 811 - -
Amo09g1056 816 SUPERFAMILY Protein kinase-like (PK-like) 480 791 IPR011009 -
Amo09g1056 816 Gene3D Phosphorylase Kinase; domain 1 463 586 - -
Amo09g1056 816 SUPERFAMILY RCC1/BLIP-II 23 309 IPR009091 -
Amo09g1056 816 Pfam Protein kinase domain 504 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1056 816 MobiDBLite consensus disorder prediction 436 465 - -
Amo09g1056 816 SMART serkin_6 502 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1056 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Amo09g1056 816 Gene3D Transferase(Phosphotransferase) domain 1 587 806 - -
Amo09g1056 816 Gene3D - 203 343 IPR009091 -
Amo09g1056 816 ProSiteProfiles Protein kinase domain profile. 502 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g1056 816 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Amo09g1056 816 Pfam Regulator of chromosome condensation (RCC1) repeat 250 273 - -
Amo09g1056 816 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 8 811 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1056 Amo-Chr9 24811694 24814144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1056 10 816 Receptor kinase-like Gene Family AT3G55950 58.022 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Amo09g1056 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1056 - - adu:107457637 1462.97