Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1009 ATGGACGCCGCCCAGATCCATGACCCTGGCAAGACGCACGTCTGGCTCGGAACTTTTGAAACTGCAGAGGGGGCAGCGAGTGCGTACGGCGCCAAGGCTAAGACCAATGTTCCGATAGCGGCGGAGCTTCTAAACAACAGCAACAACTTCGTTCACATTAACGACAACACATGTTGCCCGAGCCAGAGTAGCATGCTTGATTCATCTTCGCGGCTGCCGCCACTGCCACCGTCAGTGCAGTCCTAG 246 0.565 MDAAQIHDPGKTHVWLGTFETAEGAASAYGAKAKTNVPIAAELLNNSNNFVHINDNTCCPSQSSMLDSSSRLPPLPPSVQS* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1009 81 SMART rav1_2 3 44 IPR001471 GO:0003700|GO:0006355
Amo09g1009 81 ProSiteProfiles AP2/ERF domain profile. 1 47 IPR001471 GO:0003700|GO:0006355
Amo09g1009 81 Gene3D AP2/ERF domain 3 45 IPR036955 GO:0003700|GO:0006355
Amo09g1009 81 MobiDBLite consensus disorder prediction 62 81 - -
Amo09g1009 81 SUPERFAMILY DNA-binding domain 4 35 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1009 Amo-Chr9 22468479 22468724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1009 3 70 AP2-EREBP Transcription Factor Family AT3G15210 50.633 6.58e-13 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1009 K09286 - cpap:110808945 53.9138