Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1002 ATGGATCATGCCAACAATACTCTTGCACTCTTTGTTCTAATTCAGTATATTCCCAGGCTCTTTCTTATCTTCCCTTTGAACCAGCATATTACGAAAACCACTGGCGTTATTGCCAAAACCCTCTGGATTGCAGCTGCATACAATCTTCTTCTCTACATGCTAGCTAGTCATTGTGAGGTCACCTGCAAGGCAACACTGGCTAAATGTCACTCTAAGTTATTTCCAAATGTGACCCCAAGGCCAAGCTCAACGTCAAGCATAAGTTTGGCATGTTTGCAGATGCTTTTCTCAATGATGTTGTTACTACTAACTTTGTGGAAAGATACTTCTATTGTCTTTGGTGGGGATTAA 351 0.4103 MDHANNTLALFVLIQYIPRLFLIFPLNQHITKTTGVIAKTLWIAAAYNLLLYMLASHCEVTCKATLAKCHSKLFPNVTPRPSSTSSISLACLQMLFSMMLLLLTLWKDTSIVFGGD* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1002 116 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 2 58 - -
Amo09g1002 116 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1002 Amo-Chr9 22249293 22249858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1002 2 57 Ion Channels AT5G14870 76.786 9.25e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1002 K05391 - qsu:112029375 102.064