Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1001 ATGTTGCAGAGCATGACAGTGCATAATATAAGGAATACTCAGGATCTGCTAGAACTGGCGATGGATCTGTTAGACGAGATCAAGTTGGTGGGTTTCTGTGTTGTTGGCTTATGTATTTTGCAGCTTGTTCATCAGGGTTCACTGAATTATATTAGTTCCCAGTTACAACCAAAAATAACTTCAAGAGATCCTGTTTCTCAAAGCAATGGGTCTTCAAGAGGTGAACACTCAGCGCCTTGGCTATGTTGCTCGCTCTGCCTTCAAGATACAGAAGCAGCACAAGCTCATCAAGGCTGGCTCATCCGTATTGGACCTCGGCTGTGCTCCGGGTGCTTGGCTCTCCACAGGGTTCCGAATTTTTGGTGGTGGTTTTGCTCAATAATCACCATTCCTAAATGTAATATAATCAAGTTTTGGCTGTTGACTTTTCAGCAAAAAGGGTTTTCTGTTATACTTTCGGACATGTGCCCTTTGGTTTCTGGAATGACAACTAAAGATGCAGCTCTGTCAGTGGAGCTAAGGATGCGAGCATTGGATTTGGCTGTTGGCAGAAGAGCTGCATTTTCAGTTTATACTGACGGTGATGATAATCAGGAAGGTGAGCAAAGCCATGATGATCCATCCACTTTGGCGAAAACTGGAGTGTTGCAAGTTGGTAGGAACCTTCTTATAAAGCTTTTGGAGAGTGAAAATGCAAAAGGTGGTGTGAACAATCTTTATGAACTCTGGGCCCTTCTCAATTTTCTTCTGCCTGAAATTTTTAGCTCTGCTGAAACTTTTGATAAATGGTTCCAAATATCAGGTAAGAAGTTTTGGAATTTGTTTCATTTGCAACCTATGCGAGATCAGAAGTTAAGGTACAACACGCACGCGCGCGCACACACATTACAGTATTTTATTGGTGTTCAACTTGATGGTAGCCAACATTTGGAGCCTCTTCACAACTGCATTGTAGATGATACTACCAAAGAGGGACAATTATTGGTAAAACAAACTGCTGAAAATGTTGATGATGCTGTTAGAGAACTTCCAGATGCTAATATGGCATATGGAGATTCATCTTTCCGGAATTGCAAGCTAGCCTTTGAGGAAGCAATGGCTACAATAGTTAAAAAGTTGCAGGCCCACAGAGCCGTTAGGATGGTTTTCCTCACCAATTTCAGGGAAGCTGAAAGGCTTTCCAAAATCCTTTTTATATATACAAAAAAGAATCCACTTTTTAGGGACAGCTTTCTGATGAATGGTTATGTTCTAAATACTGGCCGTGCAGCTCAAGGAATGCCTCTAAACAGCTGGATTTGTGAGTTTTAG 1311 0.4172 MLQSMTVHNIRNTQDLLELAMDLLDEIKLVGFCVVGLCILQLVHQGSLNYISSQLQPKITSRDPVSQSNGSSRGEHSAPWLCCSLCLQDTEAAQAHQGWLIRIGPRLCSGCLALHRVPNFWWWFCSIITIPKCNIIKFWLLTFQQKGFSVILSDMCPLVSGMTTKDAALSVELRMRALDLAVGRRAAFSVYTDGDDNQEGEQSHDDPSTLAKTGVLQVGRNLLIKLLESENAKGGVNNLYELWALLNFLLPEIFSSAETFDKWFQISGKKFWNLFHLQPMRDQKLRYNTHARAHTLQYFIGVQLDGSQHLEPLHNCIVDDTTKEGQLLVKQTAENVDDAVRELPDANMAYGDSSFRNCKLAFEEAMATIVKKLQAHRAVRMVFLTNFREAERLSKILFIYTKKNPLFRDSFLMNGYVLNTGRAAQGMPLNSWICEF* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1001 436 Pfam FtsJ-like methyltransferase 141 251 IPR002877 GO:0008168|GO:0032259
Amo09g1001 436 PANTHER FLIPPASE KINASE 1-RELATED 267 349 - -
Amo09g1001 436 PANTHER PHOTOTROPIN-1 267 349 - -
Amo09g1001 436 Gene3D Vaccinia Virus protein VP39 113 260 IPR029063 -
Amo09g1001 436 Gene3D PAS domain 262 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1001 Amo-Chr9 22218450 22234747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1001 264 352 AGC Kinase Gene Family AT3G45780 60.674 1.25e-27 114