Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo09g0991 | ATGGCGCCAATCATGCAATCCTCTCAGCCTTGGGTCGAAAAATACCGACCAAAACAAGTGAAAGACGTAGCTCACCAAGAMGAAGTTGTTCGTGTCCTCACCAACACTCTCGAAACTGGAAGCTGCCCCCACATGCTCTTCTATGGACCCCCCGGCACCGGAAAAACAACCACTGCTCTTGCAATAGCTCACCAGCTTTTCGGGCCTGAGCTTTACAAGTCTAGGGTGCTGGAGCTCAATGCAAGTGATGACCGTGGGATTAATGTTGTTCGCACCAAGATAAAGGATTTTGCAGCCGTCGCAGTTGGTACTATTCAGCACAAGGGTGGTTATCCTTGTCCACCATATAAGATTATTGTCTTGGATGAGGCAGATTCAATGACTGAAGATGCTCAGGCATGTTTGCATATTTACATTTTTATTTTTTTATTTTCTAACTTTAATTGTCACATAAGTGTCTGTGGTTACTGGATCATAGAACCACTGGCTTCAAGGTGTGCAAAATTCAGGTTCAAGCCATTGTCAGAAGAGATCATGAGCAACCGAATACTGTACATTTGCAATGAAGAAGGACTCAATCTTGATGCTAAGGCTCTTTCAACCCTGAGTTCTATCTCTCAAGGAGATCTTCGTCGGGCTATCACATACTTGCAGTCAGCGGCYCGATTATTTGGATCTTCCATTTCTTCAGAGGACCTGATTTCAGTATCTGGGGTTGTTCCAGCAGAGGTAGTGGAGGCAATTCTGAAAGCATGCAAAAGTGGAAATTTTGATTCAGCCAACAAGGAAGTAAACAATTTCATTGCAGAGGGATATCCAGCCTCTCAGATACTAACTCAGTTATTTGAGGCCATTCTTGAAGATGACATATCAGATGAACAGAAAGCAAGAATCGCCAAGAAGCTGGGAGAAGCAGATAAGTGTCTGGTTGATGGTGCTGATGAATACTTGCAGCTTCTTGACACAGTCAGCACTACAATGCAAGCTTTTTGTAACATGCCGGAAGGATTTGCTTATGGGAGTTAG | 1026 | 0.4386 | MAPIMQSSQPWVEKYRPKQVKDVAHQXEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTIQHKGGYPCPPYKIIVLDEADSMTEDAQACLHIYIFIFLFSNFNCHISVCGYWIIEPLASRCAKFRFKPLSEEIMSNRILYICNEEGLNLDAKALSTLSSISQGDLRRAITYLQSAARLFGSSISSEDLISVSGVVPAEVVEAILKACKSGNFDSANKEVNNFIAEGYPASQILTQLFEAILEDDISDEQKARIAKKLGEADKCLVDGADEYLQLLDTVSTTMQAFCNMPEGFAYGS* | 342 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo09g0991 | 341 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 8 | 234 | IPR027417 | - | |
Amo09g0991 | 341 | SMART | AAA_5 | 41 | 177 | IPR003593 | - | |
Amo09g0991 | 341 | CDD | HLD_clamp_RFC | 174 | 233 | - | - | |
Amo09g0991 | 341 | PANTHER | REPLICATION FACTOR C SUBUNIT 4 | 6 | 329 | - | - | |
Amo09g0991 | 341 | SUPERFAMILY | post-AAA+ oligomerization domain-like | 240 | 324 | IPR008921 | GO:0003677|GO:0006260 | |
Amo09g0991 | 341 | Pfam | ATPase family associated with various cellular activities (AAA) | 45 | 131 | IPR003959 | GO:0005524|GO:0016887 | |
Amo09g0991 | 341 | Gene3D | - | 2 | 173 | IPR027417 | - | |
Amo09g0991 | 341 | Gene3D | - | 176 | 239 | - | - | |
Amo09g0991 | 341 | Gene3D | - | 240 | 328 | - | - | |
Amo09g0991 | 341 | PANTHER | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 6 | 329 | - | - | |
Amo09g0991 | 341 | Pfam | Replication factor C C-terminal domain | 241 | 324 | IPR013748 | - | |
Amo09g0991 | 341 | CDD | AAA | 26 | 166 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo09g0991 | Amo-Chr9 | 21324186 | 21327761 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo09g0991 | 1 | 337 | Core DNA Replication Machinery Family | AT1G21690 | 72.141 | 8.28e-177 | 491 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo09g0991 | K10755 | - | gmx:100798331 | 550.436 |