Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0978 ATGCCAATGGAGATGGAGAAAAGACGATTCAAGGGTAGAAGCTTCCTCAGCTTCTTTGATTGGAATAGCAAATCTCAAAAGAAGCTTCTTTTTGACAAACCTAACAACTTACCCGAAGTTTCAAATCAAGGAAAGGAAAATGTGGGCAACATGCCACAGGCACAGATGAATAAGATAAAGGTTGGGGATAATGGAGCAAGTCCTGGTAATGTTGCTGCAAGCTGTGATTTTAATTGTGCCCTATCAATTAGTAGCGATGAAGGATGTGAGACTAAAGCCCCAGGGTTAGTAGCTAGACTTATGGGTTTGGATTCATTACCAGCTTCAACAGTCCCTGAGCTCTCCTCGACTTCATTGTACGGATCCAACTCTCTTGGATCTTCTCATTGTCAAGATGGTTCTCTACGTTGCATGGCTGACTCTTGTCCTGTGGACTGCACTATGCCACTTAAGCTGGAGAAGTCTTCTTCAGGGGATATGAAACCAAAGTCTCAGAAAGTTGGAAATCTGCCGGCACTAAGGAGATTTCAGAATGAAACATTGCCTCCAAAGTCAGCTAAACCAATTCCAGTTACTCACAACAAACTTTTGTCTCCTATCAAGAACCCTGGCTATGTTCAACCTAGGAATGTGGCTCAGATAATGGACGCGGCTACTAAGATAATTGAGGCAAGTCCCCTGCAATATGCAAGGAATGGAATGTCTTCAGTTGGGCCTTCTTCTGTTCCCTTAAGAATTCTTGATCTGAAAGAGCAATTGGAAGGTGCACAGTATGAATCCAAGCTTGTCAATCGGCACATTGCTAACCATGTGAATGGTAAGCCTAATGAGAGGAGTAATTTGTATAAAGGCACTCTAACATTCAAACGTTTAGGGGATTCAGAAAAGAACAGTTCTAGTTATTTAGGAAATAAAGGAAAATCTGCTTCAGTTGTGATACCAACCAAAGCCGACGTTCAGAACAGAGATACATCAGCTTTGAAAGGTAAGAAGGGACATATGAACTCGAAAGAAGATAGTAACATAAAACCAAACCAATCATCCCGGAGCCAGAAGAAGCAATTTACAGACCCGACCCGAGCCATTCCGCAGAGAGCTTTCACAGGCCAAAATAGCAATGTGCTTGGGCAGAATAACATAAACCATAAAGGCAAATTGACTTCAAAAAGGGAGTCCAATAAGCCAACAACACGAACTTGGTCTTCAGAAAGCTCTACTGCAGCACGGAAGGCAGCAAATAAGGGTGCTGCTGTAAATGGCAATACTGAGCCCAATAGGTCAAGTACAAGGGTAATTGATTCTCGAAAGGAGTCTACAGTGTCAAAAAGACAGAGTATTTCTGAAAAGAAAAAGTATATTAGTAGGGCTGTTCACAATGATACAAGAGGTACTGAGAATGTAGTTGATAATTTTGAGAACAAGTCCATAAAATGCAATATTACAACTGATAGAAGTACCAACCAGAATGCAGTTAGCATGAGTGAAAGCAAAGATGTGATATCGTTTACATTTACATCTCCCTTGGGGAGAACCATGCCTGAGTCACAGCCCTCGACTGCACAGGTGACAGAAACAAGCAACAGAGTTCATGCCAATACTCATGCTTGTCGTCCCAAGAAGCTATCATCATCTACTCTTGTGATGGACAGTGACACAATAGATGGCGATACTTTAAGTGTCCTTTTGGAGAAAATGCTTCAAGAATTGCCATCTAGGATTAACTCACCGCAATGTACCCTGATATCAGATGAGTCTTCTTCTGGAAGTTGTAATATTCAGGACAATGGTTTTGCTTCAAGTGATAATCTGGTGCTTACCATGAATCAGCAACTGCAGACAACAGATCCAATGGAAGAGCCTAGCTGTGGCAGCAGTGAAAGTGGGAATGATATAGGTTGTCAGCATTCAGGAGCTGTTACGCTTTTTGAAAATCCTGCTGCTGTCGAAAGTTACTTGGATTGTGAATACAGTATATTTGGAAGCACGCTTTATCCTTCCATACAGGATGAAGAAGTATCGAATTTTTCTCCGTGGTCTGAGCAAAGCTCCGAGGTCACAGAAGGAAGCACGTCCATCAAACAATTTAGTGGAATATCAAATGTGATAGGTTTTAGGAGATCAACAAGGGAGATGGAACTCGAATACATAAAGGACATTCTTAGTGCAGAGCTTATGGCAGAAGAATTTGTAATTGGTGAAACAAATAAGATCATAATGCCAAACCTGTTTGATATATTGGAGATTCAGAATGCTGAGAACTACATAGAGTACTCTCAGCTTGAGAGAAAGGTTTTATTTGACACTGTGAGTGACTGCTTAGAACTAAGATACAGAAAAGCTTTTGTTGGAAGCTGCAAAGCATGGCCTGAATGGGTGGCATCAGTTCAGAGAAAGAACTTGTTGGCAGAAGAATTATTAAAAGAGATAATCAGTCTTAGAAGCATGGAAGAGGTAGTAATGGTGGATGAACTTGTGCATAAGGACATGAGCATTGGATTGGGTAGATGGATTGACTTCGACATTGAAGCCTTTGAAGAGGGTTTAGATGTTGAATTTGGCATAGTGACCAATTTGATTAACGAATTGGTTTATGAGTTGATGATTGTTTAA 2610 0.4103 MPMEMEKRRFKGRSFLSFFDWNSKSQKKLLFDKPNNLPEVSNQGKENVGNMPQAQMNKIKVGDNGASPGNVAASCDFNCALSISSDEGCETKAPGLVARLMGLDSLPASTVPELSSTSLYGSNSLGSSHCQDGSLRCMADSCPVDCTMPLKLEKSSSGDMKPKSQKVGNLPALRRFQNETLPPKSAKPIPVTHNKLLSPIKNPGYVQPRNVAQIMDAATKIIEASPLQYARNGMSSVGPSSVPLRILDLKEQLEGAQYESKLVNRHIANHVNGKPNERSNLYKGTLTFKRLGDSEKNSSSYLGNKGKSASVVIPTKADVQNRDTSALKGKKGHMNSKEDSNIKPNQSSRSQKKQFTDPTRAIPQRAFTGQNSNVLGQNNINHKGKLTSKRESNKPTTRTWSSESSTAARKAANKGAAVNGNTEPNRSSTRVIDSRKESTVSKRQSISEKKKYISRAVHNDTRGTENVVDNFENKSIKCNITTDRSTNQNAVSMSESKDVISFTFTSPLGRTMPESQPSTAQVTETSNRVHANTHACRPKKLSSSTLVMDSDTIDGDTLSVLLEKMLQELPSRINSPQCTLISDESSSGSCNIQDNGFASSDNLVLTMNQQLQTTDPMEEPSCGSSESGNDIGCQHSGAVTLFENPAAVESYLDCEYSIFGSTLYPSIQDEEVSNFSPWSEQSSEVTEGSTSIKQFSGISNVIGFRRSTREMELEYIKDILSAELMAEEFVIGETNKIIMPNLFDILEIQNAENYIEYSQLERKVLFDTVSDCLELRYRKAFVGSCKAWPEWVASVQRKNLLAEELLKEIISLRSMEEVVMVDELVHKDMSIGLGRWIDFDIEAFEEGLDVEFGIVTNLINELVYELMIV* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0978 869 MobiDBLite consensus disorder prediction 339 383 - -
Amo09g0978 869 Pfam Domain of unknown function (DUF4378) 712 861 IPR025486 -
Amo09g0978 869 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 594 - -
Amo09g0978 869 MobiDBLite consensus disorder prediction 323 338 - -
Amo09g0978 869 MobiDBLite consensus disorder prediction 312 446 - -
Amo09g0978 869 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 596 869 - -
Amo09g0978 869 MobiDBLite consensus disorder prediction 393 409 - -
Amo09g0978 869 Pfam DUF761-associated sequence motif 84 111 IPR032795 -
Amo09g0978 869 Coils Coil 868 869 - -
Amo09g0978 869 MobiDBLite consensus disorder prediction 429 446 - -
Amo09g0978 869 PANTHER DUF4378 DOMAIN PROTEIN 3 594 - -
Amo09g0978 869 PANTHER DUF4378 DOMAIN PROTEIN 596 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0978 Amo-Chr9 20471205 20475424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0978 5 867 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 31.126 2.97e-81 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0978 - - gmx:100797988 895.96