Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0948 ATGTTGGATAATATGGTTTTATCTCTACCTAATGGGGATGTGAATATATCAATGCTGAAAGAGGTTGTGCAGTTATTGAGTTTTCAAAAACTAAATGGACTTGATTGGAATGTGGTGGTGTTTTTTTTAGCCGCAATTACATGGGAGGCAGGGAAACCATTGGTGATTGAAGAAATGGAGGTTGCGCCACCTAAGGCCGGTGAAGTTCATTTGAAGATCCTCTACAACTCACTTTGCCGCACCAATATTTACTTCTGGGAAGCCAAGGGCCAGACTCCATTATTTCCTCGGATATTTGGTCATGAAGCTGGAGGGATTTTGGAGAGTGTAGGAGAGGGAGTGACTCATCTGAAACCAGGTGACTATGCCTTCCCTGTGTTCACTGGAGAGTGTGGTGAATGCCCTCATTGCAAGTTAGAGGAGAGAAACATGTGTGACCTTTTCAGGATCAACACTGACAGGGGTGAAAAACCAATTTACCATTTTGATAGGACCTCCACATTTAGTGATACATTGTGGTTCATGCTGGATGTGTTGCAAAGATCAACCCTGAAGCACCACTTGACAAAGTTTGTGTTCTCAACTGTGGAATCTGCACATGTCTTGGTGCCACTATCAATGTTGCAAAACCAAAACCTGGCTGTTGAAAGGGCAAGGATTTCTGGTGCATCAAGAATCATTGGGGTTGATTTAGTTTTTAGCCAATTCGAATTAGCTAAGAAGTTTGGGGTTAATGAATTTGTGAACCCGAAAGATCATAACAAAGATGTACAAGATGTAATTGCTGAAATGACCAATGGAGGCGTGGATCGTTCTGTTGAATGTACTGGCAGCATCCAAGCTATGATCTCAGCATTTGAATGTATCCATGATCAAACGTTGCCGTTTCAAGCTGCTGCACTTATTGTCACTCACTCACCCCTAACTCCATCCTCCTGTGCCAGATCCAGATTCCAGAATGCCTCTCTCACACTCAGTCCAGGGCTGGGCTCCTCTCAATCTCATCGAGCTCTTTGGTCGTCCCTCACCTCCGTCCAGCCACCGCCTCGTGCCGCCGCCGTCGTTCCTTCGAACAGCCACCATCTGCTCACTCCCTTCCCCTCCATCATGCAGCAGCCATCACAACCTTCCTTCCCTTCCATCGCGCAGCCACTGTATGAACGTCGAAGCCTCCGTCGCGCAGCCACGCCGCATCTGACATTAGCTCTGTTCCTCTGCAACCATTGTCCCGTTCGAAGGTGCTCCATTACTCCTTGTCTTGGTCACTCGGTGTCTCTTTCTCCCTCTTACATGCTTTGTTGA 1302 0.4677 MLDNMVLSLPNGDVNISMLKEVVQLLSFQKLNGLDWNVVVFFLAAITWEAGKPLVIEEMEVAPPKAGEVHLKILYNSLCRTNIYFWEAKGQTPLFPRIFGHEAGGILESVGEGVTHLKPGDYAFPVFTGECGECPHCKLEERNMCDLFRINTDRGEKPIYHFDRTSTFSDTLWFMLDVLQRSTLKHHLTKFVFSTVESAHVLVPLSMLQNQNLAVERARISGASRIIGVDLVFSQFELAKKFGVNEFVNPKDHNKDVQDVIAEMTNGGVDRSVECTGSIQAMISAFECIHDQTLPFQAAALIVTHSPLTPSSCARSRFQNASLTLSPGLGSSQSHRALWSSLTSVQPPPRAAAVVPSNSHHLLTPFPSIMQQPSQPSFPSIAQPLYERRSLRRAATPHLTLALFLCNHCPVRRCSITPCLGHSVSLSPSYMLC* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0948 433 Gene3D - 50 171 - -
Amo09g0948 433 PANTHER ALCOHOL DEHYDROGENASE-RELATED 39 169 - -
Amo09g0948 433 SUPERFAMILY GroES-like 41 172 IPR011032 -
Amo09g0948 433 Pfam Zinc-binding dehydrogenase 213 290 IPR013149 -
Amo09g0948 433 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 100 114 IPR002328 GO:0008270|GO:0016491
Amo09g0948 433 Pfam Alcohol dehydrogenase GroES-like domain 67 146 IPR013154 -
Amo09g0948 433 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 213 291 IPR036291 -
Amo09g0948 433 Gene3D - 211 309 - -
Amo09g0948 433 PANTHER ALCOHOL DEHYDROGENASE 39 169 - -
Amo09g0948 433 PANTHER ALCOHOL DEHYDROGENASE 214 292 - -
Amo09g0948 433 PANTHER ALCOHOL DEHYDROGENASE-RELATED 214 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0948 Amo-Chr9 18863784 18869351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0948 68 145 Monolignol Biosynthesis Gene Families AT4G39330 32.911 4.00e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0948 K18857 - gmx:100801918 337.421