Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0943 ATGTTTGATTTGCTTGTGTTGAGGGTTATTTTTATGAAATTACCCTTCATTGCTGAAGAACAAGGTTCCACCTTTCTCTCTTCAGAAAACTCTATCCCACTCAAACTCCAAAACCCACCTCCAAATTTGCCTCTTTTGTATCACACAGCAAGAGTCTTCACCACCAACGCAAGGTACAGGTTCAACATGAAGAGAAACGGCACCAACTTTGTGCGTTTCCATTTCTACGCTTTTAAAGCTCCGAGTTTTGACCTCAAGCATGCTAAATTCAGTGTCTTTGTTAATGGGGTCTCACTTTTAAGGCCTGTTGCTACTGGTGGTGGTAGCAACTCAGGATTTGGATTTGTGAATGGTTTAGAGGTTTTTTCTGCTCCTGAAGATTTGATTACAGATTATGGAGCTAGGTTTGTTGGTGCTTCTGGGGTGGAAGAGTTCAAGAACCTTTCATCTCAGGTTTTAGAAACTGTTCATAGAATCAATGTTGGTGGTTTGAAAATAACACCATTTAATGATACCCTTTGGAGGACTTGGATCCCTGATGAGGGTTTTCTTGTTTTCAAGCATGCAGCTAAGTCTGCATTTACTGATCACACACCAAATTACCAGAAGGGAGGGGCAACACCAGAGATTGCCCCTGATAATGTTTACATGACTGCTCAGCAGATGAATAGGGAGAACTCGAGTTTAGCTTCGAGGTTCAACATAACTTGGAATTTTTCTGTGGATACCGGTGGTGTTCCTCATCTTGTGAGGTTGCATTTCTGCGATTTCGTTAGCCCTGCGCTTAATTTGCTCTACTTTGATGTGTATATCAATGGCTACACTGCAATTAAGGATCTTGATTTGTCGTCCCTTACGTTCCACATGCTTGCTTCTCCATACTATGTGGATTTTGTCACTGACTCGGATGATTCCGGTATTATTCAAATAAGTGTTGGTCCTTCTGATCTTAGCAGTTCTATAAGGATGAATGCCATATTGAATGGAGCAGAGATACTGAAGATGGTCAATGTTATCGATTCCAGTGCTGCACATTGGAAGAAAAGATTGTGGATTTGGATTGGTTCAGTCTCTGGAGGAATTGTTGTCTTGTGTTTAGTTGTTGCTGCTTTTCTACTTGCTATCAAATGCAGGAAGAAGAAACCAAAGCGAGGAACCGTCGAAAGCGTTGGATGGACACCTTTACAAATGTATGGAGGGAGTTCCAACAGTAGAATGTCTGAACCTGGTTCTAATGGATACACTGGCTTGAAGATCCCCTTTGCAGATATACAATTCGCGACGAATGATTTCAATAAAAGTTTGGTGATAGGGTCTGGTGGGTTTGGTATGGTTTACAAAGGAGTACTCAGAGACAATGTTAAGGTTGCTGTTAAGAGAGGCATGCCTGGGTCAAGACAGGGACTTCCGGAATTTCATACCGAGATAACTGTTTTGTCCAAAATTCGCCATCATCACCTCGTTTCGCTGGTTGGTTTTTGTGAAGAGAATTCAGAGATGATACTTGTCTATGAGTATGTTGAGAAAGGTCCCCTTAAAAGGCATTTATACGGCTCGTCCGGCTTGCCACCTCTCTCGTGGAAGCAGCGTCTAGAGATATGCATTGGCGCTGCGAGAGGCCTCCACTATCTTCACACTGGGTTTGCTCAAGGAATCATCCACCGCGACATTAAATCGACCAACATTTTGCTTGATGAAAACTATGTGGCCAAGGTTGCTGACTTTGGCCTTTCAAGATCTGGACCTTGTATCAATGAAACACATGTGAGTACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTACTTCCGGAGGCAGCAGCTAACCGATAAATCGGATGTTTATTCGTTTGGGGTTGTACTCTTTGAGGTTCTTTGTGCTAGACCAGCAGTTGATCCGCAATTGACCCGGGAACAAGTGAATTTAGCAGAATGGGCCTTAGAGTATCTTGAGAAGGGTATGCTAGAGCATATTGTTGACCCTCGCATTGCAGGGCAGATTGAACCAAGGTCATTGAAGAAATTTGGCGAAACGGCCGAGAAATGTTTGGCAGAGTATGGTGTTGATAGGCCAACTATGGGTGATGTCTTATGGAACTTGGAATATGCACTTCAGCTTCAAGAAAGTAGACAACAAAGGGAGCTGCGAGCCGGTATCAGTGCCGACGAATCAGTGAATGTGACTACAACAATTGCTCCTGGAAATTCTTCCAGCAACAGAACAGTTGTGAGGGATTATTCAGATGTAAGTAGTAGTCAAGTGTTTTCCCAGCTAATGACCAATGAAGGCAGATAG 2301 0.4302 MFDLLVLRVIFMKLPFIAEEQGSTFLSSENSIPLKLQNPPPNLPLLYHTARVFTTNARYRFNMKRNGTNFVRFHFYAFKAPSFDLKHAKFSVFVNGVSLLRPVATGGGSNSGFGFVNGLEVFSAPEDLITDYGARFVGASGVEEFKNLSSQVLETVHRINVGGLKITPFNDTLWRTWIPDEGFLVFKHAAKSAFTDHTPNYQKGGATPEIAPDNVYMTAQQMNRENSSLASRFNITWNFSVDTGGVPHLVRLHFCDFVSPALNLLYFDVYINGYTAIKDLDLSSLTFHMLASPYYVDFVTDSDDSGIIQISVGPSDLSSSIRMNAILNGAEILKMVNVIDSSAAHWKKRLWIWIGSVSGGIVVLCLVVAAFLLAIKCRKKKPKRGTVESVGWTPLQMYGGSSNSRMSEPGSNGYTGLKIPFADIQFATNDFNKSLVIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFHTEITVLSKIRHHHLVSLVGFCEENSEMILVYEYVEKGPLKRHLYGSSGLPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLTREQVNLAEWALEYLEKGMLEHIVDPRIAGQIEPRSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEYALQLQESRQQRELRAGISADESVNVTTTIAPGNSSSNRTVVRDYSDVSSSQVFSQLMTNEGR* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0943 766 Gene3D - 16 110 - -
Amo09g0943 766 Gene3D - 152 337 - -
Amo09g0943 766 Pfam Protein tyrosine and serine/threonine kinase 436 633 IPR001245 GO:0004672|GO:0006468
Amo09g0943 766 Gene3D Transferase(Phosphotransferase) domain 1 507 728 - -
Amo09g0943 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 552 564 IPR008271 GO:0004672|GO:0006468
Amo09g0943 766 ProSitePatterns Protein kinases ATP-binding region signature. 437 459 IPR017441 GO:0005524
Amo09g0943 766 Gene3D Phosphorylase Kinase; domain 1 400 506 - -
Amo09g0943 766 ProSiteProfiles Protein kinase domain profile. 431 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0943 766 CDD STKc_IRAK 437 703 - -
Amo09g0943 766 PANTHER OS07G0166700 PROTEIN 19 737 IPR045272 GO:0004714|GO:0006468
Amo09g0943 766 Pfam Malectin-like domain 112 334 IPR024788 -
Amo09g0943 766 SMART serkin_6 431 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0943 766 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 19 737 - -
Amo09g0943 766 SUPERFAMILY Protein kinase-like (PK-like) 407 703 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0943 Amo-Chr9 18799700 18802900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0943 46 766 Receptor kinase-like Gene Family AT3G46290 49.421 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo09g0943 PK_Tyr_Ser-Thr 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0943 - - gmx:100801169 1160.59