Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0916 ATGTCAATGGGTGTTTATGGATCGGATTCGATTCGCATATCCGCAACAAGAAGAGAAATTGCACTGATTCAACATGCATCATATTGTCAAACTTTAAGTTGCACATTTCCAAAGTGTTTGAGGGTGAGGAAACTTATCAGGCATAAGGAAGATTGTATGATTGGTATTGATGAAGGAGATTGTTCGGAATGCATGGAAATTTGGGATTTGCTTAAGCTTCATGCTAAATATTGCAACACACCAGATCCTGAGTGTGAATTCTTATTTGGAGCGATTTTCGTGGAAATTCTCATATTTTGGGGAGTTTTGCCATTCCTAAACTGA 324 0.3796 MSMGVYGSDSIRISATRREIALIQHASYCQTLSCTFPKCLRVRKLIRHKEDCMIGIDEGDCSECMEIWDLLKLHAKYCNTPDPECEFLFGAIFVEILIFWGVLPFLN* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0916 107 SUPERFAMILY TAZ domain 16 86 IPR035898 -
Amo09g0916 107 Pfam TAZ zinc finger 18 86 IPR000197 -
Amo09g0916 107 Gene3D TAZ domain 8 92 IPR035898 -
Amo09g0916 107 ProSiteProfiles Zinc finger TAZ-type profile. 9 88 IPR000197 -
Amo09g0916 107 SMART TAZ_2 9 88 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0916 Amo-Chr9 18255870 18259776 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Amo09g0916 zf-TAZ 9.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0916 - K04498 aip:107617072 159.073