Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo09g0915 | ATGGACGAAGATCTCGACTTGCCGACGGCGGAGCCTATGAACGACGACTTCGACTTCGCCGGCGGCGGCGGCGTTGGAATGGACGACGATTTCCCCGTTCTCAAGGTCGGAGAGGAGAAGGAAATTGGCAAGCTTGGATTGAAGAAGAAGCTCCTTAAAGAAGGTGAAGGATGGGAGAATCCTGAAGCCGGTGATGAAGTCCAAGTTCACTATACCGGGACTCTGCTTGATGGCACCAAGTTTGATTCCAGCAGAGATAGGGGAGCCCCTTTCACGTTCACACTTGGACAAGGGCAAGTAATTAAAGGATGGGATGAAGGTATTAGAAGCATGAAGAAAGGTGAAAATGCCCTTTTCACCATCCCACCTGAGCTAGCTTATGGTGAATCCGGTTCTCCTCCCACAATTCRGCCCAAAGCAACTCTTCAATTTGATGTTGAGCTGTTGTCTTGGACTAGTGTGAAGGACATATGTAAGGATGGTGGTTTGTTTAAGAAGATACTTGTTGAGGGAGAGAAATGGGAGAACCCTAAGGATCCTGATGAAGTTCTGGTTAATTATGAGGCACGCCTTGAAGATGGAACACTTGTAAAGAAATCTGATGGGGTAGAGTTCACAGTAGAAGACGGTCACTTTTGCCCTGCATTGTCAAAGGCCATCAAAACAATGAAGAAGGGGCAAAAAGTAATTTTGACTGTAAAGCCACAATATGGATTTGGCGAGAAGGGTAAGCCAGCCCATGGTGATGAAGGTGCAGTTCCACCAAATGCAACATTGCTGATTACTCTTGAGTTAGTCTCTTGGAAGACAGTGACCAATGTAACTGATGACAAGAAGGTCATGAAAAAGATCCTTACTGAAGGAGAAGGATATGAGCGTCCKAATGAGGGATCCATTGTGAAATTGAAACTTACTGGTAAGCTGCACGATGGCACTATTTTTGTGAAGAAGGGCCATGATGGTGAAGGGGAACTACTTGAATTCAAAACAGATGAGGAGCAAGTAATTGAGGGGCTTGATAAGGCCATGTTGACYATGAAGAAGGGCGAGGTAGCACTGTTGACTATTGCTCCTGAGTATGCGTTTGGTTCATCAGAATCCAAGCAAGAATTGGCAGTTGTTCCACCTGACTCCACTGTGTATTATGAGGTTGAATTAGTATCTTTTGTGAAGGATAAGGAATCTTGGGACATGGAAACTCCAGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGGAATGCACTGTTTAGAGCTGGTAAATATGCAAAAGCTTCTAAAAGATATGAGAAGGCTATTAAGTTCGTAGAATATGATACCAACTTCAGCATTGAAGAGAAGAAGAGTGCCAAGGACTTGAAGATTGCTTGCAACTTGAATGATGCAGCTTGCAAGTTGAAGTTGAAAGATTATAAACAAGCAGAGAAATTGTGTACAAAGGTTTTGGACCTTGAGAGCACAAATGTGAAAGCACTCMATAGAAGAGCACAAGCATATATCCAGTTAGCTGACTTGGATTTGGCAGAATTTGATATCAAGAAAGCACTTGAGATTGACCCTAATAACAGGGATGTTAAGCTAGAGTACAGGATTTTGAAGGAAAAGATGAAGGAGTACAACAAAAAAGAGGCAAAATTTTATGGAAATATGTTCAGCAAAATGACCAAGTTAGACAAACCTGCCTCCACGGATTCACAACCCATGAGCATTGACAACAAGGCATAA | 1728 | 0.4306 | MDEDLDLPTAEPMNDDFDFAGGGGVGMDDDFPVLKVGEEKEIGKLGLKKKLLKEGEGWENPEAGDEVQVHYTGTLLDGTKFDSSRDRGAPFTFTLGQGQVIKGWDEGIRSMKKGENALFTIPPELAYGESGSPPTIXPKATLQFDVELLSWTSVKDICKDGGLFKKILVEGEKWENPKDPDEVLVNYEARLEDGTLVKKSDGVEFTVEDGHFCPALSKAIKTMKKGQKVILTVKPQYGFGEKGKPAHGDEGAVPPNATLLITLELVSWKTVTNVTDDKKVMKKILTEGEGYERPNEGSIVKLKLTGKLHDGTIFVKKGHDGEGELLEFKTDEEQVIEGLDKAMLTMKKGEVALLTIAPEYAFGSSESKQELAVVPPDSTVYYEVELVSFVKDKESWDMETPEKIEAAGKKKEEGNALFRAGKYAKASKRYEKAIKFVEYDTNFSIEEKKSAKDLKIACNLNDAACKLKLKDYKQAEKLCTKVLDLESTNVKALXRRAQAYIQLADLDLAEFDIKKALEIDPNNRDVKLEYRILKEKMKEYNKKEAKFYGNMFSKMTKLDKPASTDSQPMSIDNKA* | 576 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo09g0915 | 575 | Gene3D | - | 156 | 269 | IPR046357 | GO:0003755 | |
| Amo09g0915 | 575 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 13 | 276 | - | - | |
| Amo09g0915 | 575 | Gene3D | - | 270 | 392 | IPR046357 | GO:0003755 | |
| Amo09g0915 | 575 | SUPERFAMILY | FKBP-like | 46 | 157 | - | - | |
| Amo09g0915 | 575 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 297 | 390 | IPR001179 | GO:0003755 | |
| Amo09g0915 | 575 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 291 | 387 | IPR001179 | GO:0003755 | |
| Amo09g0915 | 575 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 59 | 149 | IPR001179 | GO:0003755 | |
| Amo09g0915 | 575 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 175 | 266 | IPR001179 | GO:0003755 | |
| Amo09g0915 | 575 | Gene3D | Tetratricopeptide repeat domain | 393 | 550 | IPR011990 | GO:0005515 | |
| Amo09g0915 | 575 | SUPERFAMILY | FKBP-like | 275 | 407 | - | - | |
| Amo09g0915 | 575 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Amo09g0915 | 575 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 180 | 269 | IPR001179 | GO:0003755 | |
| Amo09g0915 | 575 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 278 | 389 | - | - | |
| Amo09g0915 | 575 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 390 | 560 | - | - | |
| Amo09g0915 | 575 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 13 | 276 | - | - | |
| Amo09g0915 | 575 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 64 | 152 | IPR001179 | GO:0003755 | |
| Amo09g0915 | 575 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 278 | 389 | - | - | |
| Amo09g0915 | 575 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 390 | 560 | - | - | |
| Amo09g0915 | 575 | SUPERFAMILY | TPR-like | 397 | 555 | IPR011990 | GO:0005515 | |
| Amo09g0915 | 575 | SMART | tpr_5 | 490 | 523 | IPR019734 | GO:0005515 | |
| Amo09g0915 | 575 | SMART | tpr_5 | 407 | 440 | IPR019734 | GO:0005515 | |
| Amo09g0915 | 575 | SMART | tpr_5 | 456 | 489 | IPR019734 | GO:0005515 | |
| Amo09g0915 | 575 | Gene3D | - | 39 | 155 | IPR046357 | GO:0003755 | |
| Amo09g0915 | 575 | ProSiteProfiles | TPR repeat profile. | 490 | 523 | IPR019734 | GO:0005515 | |
| Amo09g0915 | 575 | SUPERFAMILY | FKBP-like | 156 | 271 | - | - | |
| Amo09g0915 | 575 | Coils | Coil | 523 | 543 | - | - | |
| Amo09g0915 | 575 | Pfam | Tetratricopeptide repeat | 491 | 523 | IPR019734 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo09g0915 | Amo-Chr9 | 18247183 | 18251811 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo09g0915 | 29 | 575 | Calmodulin-binding Proteins | AT5G48570 | 75.956 | 0.0 | 848 |