Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0885 ATGGATGATTCAACCTCAAATTGTCAGCTGAATCAGGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTTTCTCTGTTGTTGATGACCAGTTTGTTCTCAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTCACAGGAACTACGCCAAGGCTGTAGGTTTTTCTACAAGAGTTCGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAAGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACGAATCCGACATCCAGTTTAAACTTTCCTGCAAGAATTTATATACACACGTTGAAGGATGTTGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACTCTTACTGTCCAAGTAAAGCAGAGATGCTCAAATAG 435 0.4023 MDDSTSNCQLNQGEVDYEFESNEVPEPFSVVDDQFVLKVGMTFTTLEDAGKFHRNYAKAVGFSTRVRSTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTSSLNFPARIYIHTLKDVGAWIISKVVLDHSHSYCPSKAEMLK* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0885 144 Pfam FAR1 DNA-binding domain 51 135 IPR004330 -
Amo09g0885 144 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 39 134 - -
Amo09g0885 144 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 39 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0885 Amo-Chr9 16822766 16823530 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo09g0885 FAR1 1.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0885 - - adu:110278638 253.832