LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo09g0867	ATGGCTCCCAAATCCAAATCCAAATCCAAATCCAAATCCAAAGCCAAAACCCCGAAACCCTCTCCTTCCTCCTCCTCCAAGTCCTCCTCCTCATCCTCCATCTTCAAACCTGGCACGAGAGTCGAGGTCAGCTCCGATGACGACGGATTCCGTGGTTCTTGGTTCTCCGGCACCGTCATCCGCCGCGCTGGTGCGGACAAATTCACGGTCGAGTACGACAACCTCTTGGCCGACGAGCGGGGCAAAAAGAAGCTGAGGGAGCAGCTCGGCTTCCACCAGCTTCGGCCGCTTCCTCCGGAGGAGGCCGGCGTCGAATTCAAGTTCGGCGATGAGGTTGACGCGTTCCACAACGACGGTTGGTGGGAGGGGAGTATCACGCAGGAGCTGGAGAATGGTATGTTCGCTGTTTATTTCAGAGGGTCGAAGGAGCAGATCGAGTTTACCGCGGACCAGCTGAGGAAACATCGCGAGTGGATGAATGAGAAGTGGGTTCCGCCGTTTGCGCAGCAAGAACAAGAAGAGAATATGGTGTCAGACCCAAATGCAAAGTCTGATAAAACTGTGAAAGGGAAAGAAGTGGTGGCGACACCAAATGTGACGTCTGATGATAAAGATGTGAAAGGGAAGGGAGTGATGTTGACACCAAATGTGTCATCTGATGATGAAGGGAAGGAAGTGGTGTTGACACCAAATATAAAGTCTGATGAAACTGCAGAAGAGTTCAATTTTGAAGGTTTCCAAGGAGCTTGGTTTTCTGCCACTGTTGTTGAAGTAATTGGAGACGATAGGTTCCTTATAGAGTACAAGACCCTGCTGGACGATAATTCGAATCTTTTGAGAGAGGAGGCTGATAAGTGGCACATAAGGCCCCCTCCCCCAGCAACTTCTGAGAACATTAAATTCAGTTATCTTGAAGAAGTGGATGCTATGTACAACGATGGATGGTGGGTTGGTGTAATTTCCAAAGTTCTTGGCGACTCAAAGTACGTAAGTTTCCAACTCCCAGTTGAGGCCACATCTGGACTGGATTGGGGCAAGTGGGTCTTGGCTTCTGAGGCGTTGAACTTGTTGTGA	1074	0.5009	MAPKSKSKSKSKSKAKTPKPSPSSSSKSSSSSSIFKPGTRVEVSSDDDGFRGSWFSGTVIRRAGADKFTVEYDNLLADERGKKKLREQLGFHQLRPLPPEEAGVEFKFGDEVDAFHNDGWWEGSITQELENGMFAVYFRGSKEQIEFTADQLRKHREWMNEKWVPPFAQQEQEENMVSDPNAKSDKTVKGKEVVATPNVTSDDKDVKGKGVMLTPNVSSDDEGKEVVLTPNIKSDETAEEFNFEGFQGAWFSATVVEVIGDDRFLIEYKTLLDDNSNLLREEADKWHIRPPPPATSENIKFSYLEEVDAMYNDGWWVGVISKVLGDSKYVSFQLPVEATSGLDWGKWVLASEALNLL*	358

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Amo09g0867	357	PANTHER	AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED	30	208	-	-
Amo09g0867	357	PANTHER	AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED	244	332	-	-
Amo09g0867	357	MobiDBLite	consensus disorder prediction	1	15	-	-
Amo09g0867	357	PANTHER	AGENET DOMAIN-CONTAINING PROTEIN-RELATED	30	208	-	-
Amo09g0867	357	MobiDBLite	consensus disorder prediction	16	39	-	-
Amo09g0867	357	SMART	agenet_At_2	230	296	IPR014002	-
Amo09g0867	357	SMART	agenet_At_2	104	160	IPR014002	-
Amo09g0867	357	SMART	agenet_At_2	33	102	IPR014002	-
Amo09g0867	357	SMART	agenet_At_2	299	354	IPR014002	-
Amo09g0867	357	Pfam	Agenet domain	38	99	IPR008395	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo09g0867	Amo-Chr9	15845648	15857425	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo09g0867	45	158	PHD Transcription Factor Family	AT5G58610	28.676	1.27e-07	51.6

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo09g0867	-		-	gmx:100805605	340.887

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo19g1432	19	31616741	31619846	Amo09g0867	09	15845648	15857425	hybridization

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