Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0867 ATGGCTCCCAAATCCAAATCCAAATCCAAATCCAAATCCAAAGCCAAAACCCCGAAACCCTCTCCTTCCTCCTCCTCCAAGTCCTCCTCCTCATCCTCCATCTTCAAACCTGGCACGAGAGTCGAGGTCAGCTCCGATGACGACGGATTCCGTGGTTCTTGGTTCTCCGGCACCGTCATCCGCCGCGCTGGTGCGGACAAATTCACGGTCGAGTACGACAACCTCTTGGCCGACGAGCGGGGCAAAAAGAAGCTGAGGGAGCAGCTCGGCTTCCACCAGCTTCGGCCGCTTCCTCCGGAGGAGGCCGGCGTCGAATTCAAGTTCGGCGATGAGGTTGACGCGTTCCACAACGACGGTTGGTGGGAGGGGAGTATCACGCAGGAGCTGGAGAATGGTATGTTCGCTGTTTATTTCAGAGGGTCGAAGGAGCAGATCGAGTTTACCGCGGACCAGCTGAGGAAACATCGCGAGTGGATGAATGAGAAGTGGGTTCCGCCGTTTGCGCAGCAAGAACAAGAAGAGAATATGGTGTCAGACCCAAATGCAAAGTCTGATAAAACTGTGAAAGGGAAAGAAGTGGTGGCGACACCAAATGTGACGTCTGATGATAAAGATGTGAAAGGGAAGGGAGTGATGTTGACACCAAATGTGTCATCTGATGATGAAGGGAAGGAAGTGGTGTTGACACCAAATATAAAGTCTGATGAAACTGCAGAAGAGTTCAATTTTGAAGGTTTCCAAGGAGCTTGGTTTTCTGCCACTGTTGTTGAAGTAATTGGAGACGATAGGTTCCTTATAGAGTACAAGACCCTGCTGGACGATAATTCGAATCTTTTGAGAGAGGAGGCTGATAAGTGGCACATAAGGCCCCCTCCCCCAGCAACTTCTGAGAACATTAAATTCAGTTATCTTGAAGAAGTGGATGCTATGTACAACGATGGATGGTGGGTTGGTGTAATTTCCAAAGTTCTTGGCGACTCAAAGTACGTAAGTTTCCAACTCCCAGTTGAGGCCACATCTGGACTGGATTGGGGCAAGTGGGTCTTGGCTTCTGAGGCGTTGAACTTGTTGTGA 1074 0.5009 MAPKSKSKSKSKSKAKTPKPSPSSSSKSSSSSSIFKPGTRVEVSSDDDGFRGSWFSGTVIRRAGADKFTVEYDNLLADERGKKKLREQLGFHQLRPLPPEEAGVEFKFGDEVDAFHNDGWWEGSITQELENGMFAVYFRGSKEQIEFTADQLRKHREWMNEKWVPPFAQQEQEENMVSDPNAKSDKTVKGKEVVATPNVTSDDKDVKGKGVMLTPNVSSDDEGKEVVLTPNIKSDETAEEFNFEGFQGAWFSATVVEVIGDDRFLIEYKTLLDDNSNLLREEADKWHIRPPPPATSENIKFSYLEEVDAMYNDGWWVGVISKVLGDSKYVSFQLPVEATSGLDWGKWVLASEALNLL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0867 357 PANTHER AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED 30 208 - -
Amo09g0867 357 PANTHER AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED 244 332 - -
Amo09g0867 357 MobiDBLite consensus disorder prediction 1 15 - -
Amo09g0867 357 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 30 208 - -
Amo09g0867 357 MobiDBLite consensus disorder prediction 16 39 - -
Amo09g0867 357 SMART agenet_At_2 230 296 IPR014002 -
Amo09g0867 357 SMART agenet_At_2 104 160 IPR014002 -
Amo09g0867 357 SMART agenet_At_2 33 102 IPR014002 -
Amo09g0867 357 SMART agenet_At_2 299 354 IPR014002 -
Amo09g0867 357 Pfam Agenet domain 38 99 IPR008395 -
Amo09g0867 357 Pfam Agenet domain 244 293 IPR008395 -
Amo09g0867 357 MobiDBLite consensus disorder prediction 199 223 - -
Amo09g0867 357 MobiDBLite consensus disorder prediction 170 189 - -
Amo09g0867 357 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 244 332 - -
Amo09g0867 357 MobiDBLite consensus disorder prediction 1 50 - -
Amo09g0867 357 Gene3D - 27 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0867 Amo-Chr9 15845648 15857425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0867 45 158 PHD Transcription Factor Family AT5G58610 28.676 1.27e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0867 - - gmx:100805605 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1432 19 31616741 31619846 Amo09g0867 09 15845648 15857425 hybridization