Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0845 ATGATAAGCTTGAAAACCTTGGACTTATCTCAAAACTTTTTGTCTGGTTCAATTCCAAAATCTTTAGAGTCTCTTGCTGATCTTAAATATGTGAACTTTTCCTACAATAGACTAGAAGGAGAGATTCCCAGTGGTGGACCATTTGAAAATTTTACTGCCAATCTTTCATGCATAATGAAGCTCTTTGTGGCAAACCTCATTGGGAAAAAGATCAAGGAAAAAGCTGCTTCTGAAATGCATACTGCCCATAGTTCTTTCAATAATTTTGGTGGTTGCATTCATAACAGTTCTACAGAGGAAAAGAAAAATGGGGTAAATCAAAATGAAAAGAATTCATCATCCACTTTAGGAGCACTAAGAAAGGTTTCCCTTTTGGTTCTGTGTATCACGGAATACTCTGATGGATTGAAGGTTGCCATTAAAGTGCTTCATTTGGACTTGGAAAATACTTCAAAGAGATTTGAGGTAGAATGCAATGCAATGTGCAATCTACGCCATCGCAATCTTGTTAAGATTATCAGCAGTTATTCCAATAATCTTGATTTCAGATCCTTGGTGATGGAGTTCATGTCAAACGGAAGCCTTGACAAATGGTTATTCTCAGATAACTATTATGTTGCATCTGCATTAGAATATCTCCATCATGGTTCTCCAACGCCAGTTGTTCATTGCGACTTGAAACCTGCTAATATTTTATTAGATGATGACATGGTTGCACACTATCAATGTGCAAAGTATGGATCTAAGGGAACCATCTCAATCAAAGGTGATGTGTATAGCCATAGGATTATGTTAATGGAAGTTTTCAAAAGAAAGAAGCCAACAGACAATATGTTTGCAGAAGGATTTAGTTTGAAAATTTGGATTAGTAAATCAACATCCAATTCAATCATGGAAGTTCACTACAAGAGACACATCGAATAG 924 0.3604 MISLKTLDLSQNFLSGSIPKSLESLADLKYVNFSYNRLEGEIPSGGPFENFTANLSCIMKLFVANLIGKKIKEKAASEMHTAHSSFNNFGGCIHNSSTEEKKNGVNQNEKNSSSTLGALRKVSLLVLCITEYSDGLKVAIKVLHLDLENTSKRFEVECNAMCNLRHRNLVKIISSYSNNLDFRSLVMEFMSNGSLDKWLFSDNYYVASALEYLHHGSPTPVVHCDLKPANILLDDDMVAHYQCAKYGSKGTISIKGDVYSHRIMLMEVFKRKKPTDNMFAEGFSLKIWISKSTSNSIMEVHYKRHIE* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0845 307 Gene3D Ribonuclease Inhibitor 1 83 IPR032675 -
Amo09g0845 307 PANTHER RECEPTOR-LIKE PROTEIN 55 1 55 - -
Amo09g0845 307 SUPERFAMILY L domain-like 3 44 - -
Amo09g0845 307 ProSiteProfiles Leucine-rich repeat profile. 3 26 IPR001611 GO:0005515
Amo09g0845 307 Pfam Protein kinase domain 129 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0845 307 ProSiteProfiles Protein kinase domain profile. 105 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0845 307 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 245 296 - -
Amo09g0845 307 PANTHER RECEPTOR-LIKE PROTEIN 55 133 240 - -
Amo09g0845 307 SUPERFAMILY Protein kinase-like (PK-like) 126 288 IPR011009 -
Amo09g0845 307 SMART serkin_6 119 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0845 307 Gene3D Transferase(Phosphotransferase) domain 1 107 241 - -
Amo09g0845 307 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 133 240 - -
Amo09g0845 307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Amo09g0845 307 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 1 55 - -
Amo09g0845 307 PANTHER RECEPTOR-LIKE PROTEIN 55 245 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0845 Amo-Chr9 15188347 15203415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0845 1 65 Receptor kinase-like Gene Family AT3G47570 38.462 8.15e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo09g0845 Pkinase 5.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0845 - K13420 mtr:MTR_0070s0020 275.789