Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0828 ATGGGTTCTGATCTGAAAGTTGAATTGTCCAAGAAAACTCCAATTTTTGGTATTAAGGTTTGGGAAGTAATTGGAATTGCGGTTGGATTATTCATTATAGTGATCCTTTGTGTGCTCTCATTTTGCCTTAGTTCAAGGAAGAAGTCTAAAAAGGATAGAGATAACAAGGTTCCTGTTAGTCAAATACCTACAGTGTCGAAGGAAATCAAGGAGGTGAGGGTTGAGCAAGTGCCGGCGAATGGATTTGTCCCGCGAGATGGAATACTCCTCACAATTCATGATAAGTCCAGTGACAGAGAATCAGACAAAGTTATGGTTCACTTGGGTGTGGGGAAAATGAAGCATGGGGATAGTGGCAGCCACTCAGATTCATTTCATCACTTGGAGAAAGATGGATATGGATCACAGTCAGGGGAAGAAGGTAGCTCCGGCACGTTTAAAGCAGCATACAATCCGTCTTCTTCGTATCCTATTACAGCCCCTTCGCCTCTGTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACATTGAGGGATCTTGAACTTGCCACAAACCAGTTTTCGAAGGAGAATGTCCTTGGTGAAGGTGGCTATGGAGTTGTTTATAGGGGACAGTTGATAAATGGGACTTCAGTGGCAGTTAAGAGGATACTCAATAACATTGGTCAAGCAGAGAAAGAATTTAGGGTCGAAGTTGAAGCTATTGGCCATGTTCGACATAAAAATTTAGTTCGTCTTTTGGGGTATTGCATTGAGGGGACTCACAGGATATTAGTGTACGAGTATGTTAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCAATGCGTCATCATGGATATCTAACCTGGGAAGCGCGTATCAAGATTCTTCTGGGAACGGCTAAAGCGCTTGCTTATTTGCATGAAGCAATTGAACCGAAGGTTGTACACCGAGATATCAAGTCGAGCAACATATTAATTGATGACGACTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTGGGTGCTGGGAAGAGTCATGTTACAACAAGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGCCTTTTAAATGAGAAGAGTGATGTTTATAGTTTTGGTGTTGTGCTGCTCGAAGCAATTACTGGAAGAGATCCAGTCGACTATGGCCGTCCACCACAGGAAGTTAATCTGGTTGACTGGTTGAAAATGATGGTTGGAAACAGACGATCGGAAGAAGTAGTAGACCCGAACATTGAGGTGAAGCCATCAACCAGAGCTTTGAAACGGGCTCTCTTAACAGCTTTAAGATGTGTTGATCCAGATCATGTCAAAAGACCCAAGATGGGCCAAGTCGTACGAATGCTCGAGTCAGAGGAATACCCTTTACCCAGAGAGGATAGAAGGCAGCGAAGAAATTGTGGAAATAACTGGGAAATCGAATCCCAGAAGGATCATTCGGACACAGACAGGAGCGAGATTCAGGGTTCTGTATCAGAGAGTGGAGGGTAA 1530 0.4379 MGSDLKVELSKKTPIFGIKVWEVIGIAVGLFIIVILCVLSFCLSSRKKSKKDRDNKVPVSQIPTVSKEIKEVRVEQVPANGFVPRDGILLTIHDKSSDRESDKVMVHLGVGKMKHGDSGSHSDSFHHLEKDGYGSQSGEEGSSGTFKAAYNPSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNQFSKENVLGEGGYGVVYRGQLINGTSVAVKRILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRILVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPPQEVNLVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDHVKRPKMGQVVRMLESEEYPLPREDRRQRRNCGNNWEIESQKDHSDTDRSEIQGSVSESGG* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0828 509 ProSitePatterns Protein kinases ATP-binding region signature. 197 219 IPR017441 GO:0005524
Amo09g0828 509 Gene3D Transferase(Phosphotransferase) domain 1 267 478 - -
Amo09g0828 509 MobiDBLite consensus disorder prediction 114 134 - -
Amo09g0828 509 ProSiteProfiles Protein kinase domain profile. 191 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0828 509 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 503 - -
Amo09g0828 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Amo09g0828 509 CDD STKc_IRAK 197 463 - -
Amo09g0828 509 SUPERFAMILY Protein kinase-like (PK-like) 175 474 IPR011009 -
Amo09g0828 509 SMART serkin_6 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0828 509 MobiDBLite consensus disorder prediction 114 146 - -
Amo09g0828 509 MobiDBLite consensus disorder prediction 470 509 - -
Amo09g0828 509 MobiDBLite consensus disorder prediction 470 499 - -
Amo09g0828 509 Pfam Protein kinase domain 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0828 509 Gene3D Phosphorylase Kinase; domain 1 173 266 - -
Amo09g0828 509 PANTHER OS01G0323000 PROTEIN 3 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0828 Amo-Chr9 14398730 14403396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0828 132 465 Trihelix Transcription Factor Family AT1G70460 47.788 6.46e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Amo09g0828 Pkinase 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0828 - - gmx:100787014 860.907