Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0808 ATGGATCGTGAGCAAACGAAAGCAGCTGAGCTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCGCAGAAATATTCTGAAGCATTTCTTGGGAAGCCGAATGCAGAGTACTGTAACTGGATTCTTGACACACAGAAATGGGGAGGTGCCATTGAACTTTCAATATTGGCGGATTATTATGGACGCCAGATTGCTGCATATGATATCCAAACATCAAGATGTGACTTGTATGGTCAGGAAATGGGTTATTCAGAAAGGGTGATGCTTATTTATGATGGTCTCCACTATGATGCTTTAGCTGTGTCGCCCTTTGAGGGTGCTCCCGATGACTTCGATCAGACGATATTTGCCGTACAGAAAGACAGAAGCATTAGACCTGTTGAGGGACTTGCTCTTAATTTTGTTAAGGACCAACAGAGGAAGAGGAGATTCACCGACACCGCCAACTTCACCTTGCGCTGTGGTGTATGTCAAATAGGAGTTGTTGGTCAGAAGGAAGCTGTGGAGCATGCACAAGCAACCGGTCATGTTAACTTCCAGGAGTATAGATGA 555 0.4505 MDREQTKAAELRQVIAATVASDPQKYSEAFLGKPNAEYCNWILDTQKWGGAIELSILADYYGRQIAAYDIQTSRCDLYGQEMGYSERVMLIYDGLHYDALAVSPFEGAPDDFDQTIFAVQKDRSIRPVEGLALNFVKDQQRKRRFTDTANFTLRCGVCQIGVVGQKEAVEHAQATGHVNFQEYR* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0808 184 Gene3D - 1 149 - -
Amo09g0808 184 PANTHER UBIQUITIN THIOESTERASE OTU1 1 182 - -
Amo09g0808 184 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 1 182 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Amo09g0808 184 SUPERFAMILY Cysteine proteinases 8 100 IPR038765 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0808 1 184 C2H2 Transcription Factor Family AT1G50670 80.435 2.05e-111 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0808 K13719 - gmx:100499809 337.421