Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0806 ATGGGGATTGAAATCGTGGAGCCTAACACATGCTTCAGGGGTTGCTGTACCAGCGATTCTATTCCTCTGCATCTCCCTCCTTCCTCTTACGCTATACTCTCACCCATTGCACGAGGGGCAGAAAGTATTGTATATGAAGGGAATTTGGATGGCAAGAAGGTTGCTGTGAAGAAACCCATCTTATCAATTTCAGAGGACATTGATAAGTTTCATAAAGAATTGCAACTGCTGTGCACGCTAGATCACCCGGGAATAGCGACATTAATTGCAGCCCATGCAAAACCACCTAATTACCTGTTTTTCTTCGAATTCTATGAATCTTTGAATCTTGCCCAGAAGTTACATGTGGAAGAATGGACCCCAACTATCAATCATGCACTCGTATTAACAATGCAACTAGCAAAGGCGTTGCAATACCTGCATAATCTCGGGGTTCTACATAGAGATATAAAACCAGCGAATATCCTTCTTGACAAAAGTCTTTGTCCACACCTCACAGATTTTGGTTTAGCAGAATACAAGAATAATCTTAAGGGAGTTTCTCTAGAGAACTGGAAGTCTTCTGGAAAACCCACGGGTGGTTTTCACAAAAGAAACATGGTTGGCACACTAATTTATATGGCACCTGAAATATTAAGAAAGGAGTTACATACAGAAAAATCAGATGTATACAGTTTTGGTGTATCAATCAAGTAA 696 0.4052 MGIEIVEPNTCFRGCCTSDSIPLHLPPSSYAILSPIARGAESIVYEGNLDGKKVAVKKPILSISEDIDKFHKELQLLCTLDHPGIATLIAAHAKPPNYLFFFEFYESLNLAQKLHVEEWTPTINHALVLTMQLAKALQYLHNLGVLHRDIKPANILLDKSLCPHLTDFGLAEYKNNLKGVSLENWKSSGKPTGGFHKRNMVGTLIYMAPEILRKELHTEKSDVYSFGVSIK* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0806 231 PANTHER PROTEIN PHOSPHATASE 2C 1 230 IPR015655 GO:0004722|GO:0006470
Amo09g0806 231 Gene3D Transferase(Phosphotransferase) domain 1 17 230 - -
Amo09g0806 231 SUPERFAMILY Protein kinase-like (PK-like) 18 228 IPR011009 -
Amo09g0806 231 ProSiteProfiles Protein kinase domain profile. 30 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0806 231 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Amo09g0806 231 SMART serkin_6 30 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0806 231 Pfam Protein kinase domain 32 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g0806 231 PANTHER - 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0806 Amo-Chr9 13771116 13773293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0806 99 230 PP2C-type Phosphatase Gene Family AT2G40860 70.455 6.91e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Amo09g0806 Pkinase 2.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0806 - - vun:114166829 424.476