Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0781 ATGGTTTCCGTTATTGGCGTTTCTTCAATATACCAAACCCACGCTCTCGAACTCCACAAGAGGGCAACGTCCACAACAACAACAGCAGCTTCGGGTTCTTCCAACGCCGTTTCGCTCCCTTCGTTGTCGTTTGACAACAAGTCGCACTTCAACGCCGTTCTCAGAGCTCATTATCACCTTAACGACGGCAATAGGCGCAGGCTCGGTTTTGTTCCTACTTCTAATGCAGTTGTGACAGCTAATGACTCTTCCGTACTCAGCGAAGAAGCCTTCAAGGGTTTTGGTTTTGACGGTGTTGGCGATGATGATGAAATTGGTTATGAGTATGAGAGTGACGGTGACGCTCATTTTATTGCTTCAAGAGAAGATGAGCTCGATATTTCGAAGCTTGGCTTGCCTTCGAGGCTCGTCGACTCGCTCCAGAAACGTGGAATCACTAGCCTTTTCCCAATTCAGAGAGCTGTGTTAGTGCCTGCCTTAGAAGGTAGAGATATCATTGCCCGGGCAAAGACTGGGACAGGGAAGACATTGGCGTTTGGGATTCCCATTATTAAAGGCCTCACTGATGATGAGCAAGGTTCCTTCAGGCGTTCGGGCCGTCTTCCTAAAGTATTGGTCCTTGCACCTACTAGGGAGTTAGCAAAGCAGGTCGAGAAGGAGATAAAAGAATCTGCCCTTATCTGA 684 0.4825 MVSVIGVSSIYQTHALELHKRATSTTTTAASGSSNAVSLPSLSFDNKSHFNAVLRAHYHLNDGNRRRLGFVPTSNAVVTANDSSVLSEEAFKGFGFDGVGDDDEIGYEYESDGDAHFIASREDELDISKLGLPSRLVDSLQKRGITSLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKGLTDDEQGSFRRSGRLPKVLVLAPTRELAKQVEKEIKESALI* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0781 227 Pfam DEAD/DEAH box helicase 149 224 IPR011545 GO:0003676|GO:0005524
Amo09g0781 227 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 156 227 IPR014001 -
Amo09g0781 227 PANTHER - 41 225 - -
Amo09g0781 227 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 41 225 - -
Amo09g0781 227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 223 IPR027417 -
Amo09g0781 227 Gene3D - 110 225 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0781 Amo-Chr9 13064506 13065886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0781 101 226 Eukaryotic Initiation Factors Gene Family AT3G19760 32.540 4.01e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0781 - K16911 gmx:100779706 232.261